RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 PFN1P07737 140 aaKnown RBP15.59■□□□□ 0.09
SMARCD1-204ENST00000547637 TIRAPP58753 221 aa15.59■□□□□ 0.09
SMARCD1-204ENST00000547637 ARL6IP6Q8N6S5 226 aa15.59■□□□□ 0.09
SMARCD1-204ENST00000547637 SDF2L1Q9HCN8 221 aa15.59■□□□□ 0.09
SMARCD1-204ENST00000547637 MBD2Q9UBB5 411 aa15.59■□□□□ 0.09
SMARCD1-204ENST00000547637 A0A1W2PPV4 95 aa15.58■□□□□ 0.08
SMARCD1-204ENST00000547637 CIDEAO60543 219 aa15.58■□□□□ 0.08
SMARCD1-204ENST00000547637 NTN5Q8WTR8 489 aaPredicted RBP15.58■□□□□ 0.08
SMARCD1-204ENST00000547637 IGLV5-52A0A0A0MRZ9 124 aa15.57■□□□□ 0.08
SMARCD1-204ENST00000547637 GNRH2O43555 120 aa15.57■□□□□ 0.08
SMARCD1-204ENST00000547637 PQLC2Q6ZP29 291 aa15.57■□□□□ 0.08
SMARCD1-204ENST00000547637 PRADC1Q9BSG0 188 aa15.57■□□□□ 0.08
SMARCD1-204ENST00000547637 TREM1Q9NP99 234 aa15.57■□□□□ 0.08
SMARCD1-204ENST00000547637 IGHV3-16A0A0C4DH30 117 aa15.56■□□□□ 0.08
SMARCD1-204ENST00000547637 H0YIZ8 118 aa15.56■□□□□ 0.08
SMARCD1-204ENST00000547637 ACOT6Q3I5F7 207 aaPredicted RBP15.56■□□□□ 0.08
SMARCD1-204ENST00000547637 PPP1R1CQ8WVI7 109 aa15.56■□□□□ 0.08
SMARCD1-204ENST00000547637 NDFIP1Q9BT67 221 aa15.56■□□□□ 0.08
SMARCD1-204ENST00000547637 HSPB11Q9Y547 144 aa15.56■□□□□ 0.08
SMARCD1-204ENST00000547637 FBLL1A6NHQ2 334 aaKnown RBP15.55■□□□□ 0.08
SMARCD1-204ENST00000547637 LINC01556Q5JQF7 62 aa15.55■□□□□ 0.08
SMARCD1-204ENST00000547637 OR10J3Q5JRS4 329 aa15.55■□□□□ 0.08
SMARCD1-204ENST00000547637 GOLT1AQ6ZVE7 132 aa15.55■□□□□ 0.08
SMARCD1-204ENST00000547637 SMR3BP02814 79 aaPredicted RBP15.54■□□□□ 0.08
SMARCD1-204ENST00000547637 ASB13Q8WXK3 278 aa15.54■□□□□ 0.08
SMARCD1-204ENST00000547637 TMEM70Q9BUB7 260 aa15.54■□□□□ 0.08
SMARCD1-204ENST00000547637 SH3BGRL3Q9H299 93 aa15.54■□□□□ 0.08
SMARCD1-204ENST00000547637 DMBT1Q9UGM3 2413 aaPredicted RBP15.54■□□□□ 0.08
SMARCD1-204ENST00000547637 INMT-MINDY4F8WBC2 141 aa15.53■□□□□ 0.08
SMARCD1-204ENST00000547637 TYMSP04818 313 aa15.53■□□□□ 0.08
SMARCD1-204ENST00000547637 GATA1P15976 413 aaPredicted RBP15.53■□□□□ 0.08
SMARCD1-204ENST00000547637 RPL12P30050 165 aaKnown RBP15.53■□□□□ 0.08
SMARCD1-204ENST00000547637 LOC100131303A0A0U1RQF7 123 aa15.52■□□□□ 0.08
SMARCD1-204ENST00000547637 SERTM2A0A1B0GWG4 89 aa15.52■□□□□ 0.08
SMARCD1-204ENST00000547637 IBA57-AS1B1ANH7 110 aa15.52■□□□□ 0.08
SMARCD1-204ENST00000547637 ZNF876PQ49A33 203 aa15.52■□□□□ 0.08
SMARCD1-204ENST00000547637 SMIM3Q9BZL3 60 aa15.52■□□□□ 0.08
SMARCD1-204ENST00000547637 F6UZH7 168 aa15.51■□□□□ 0.07
SMARCD1-204ENST00000547637 K7EQM0 130 aa15.51■□□□□ 0.07
SMARCD1-204ENST00000547637 SSNA1O43805 119 aa15.51■□□□□ 0.07
SMARCD1-204ENST00000547637 MPC2O95563 127 aa15.51■□□□□ 0.07
SMARCD1-204ENST00000547637 RHOHQ15669 191 aa15.51■□□□□ 0.07
SMARCD1-204ENST00000547637 TRBV6-4A0A1B0GX49 114 aa15.5■□□□□ 0.07
SMARCD1-204ENST00000547637 Q6ZSN1 163 aa15.5■□□□□ 0.07
SMARCD1-204ENST00000547637 Q9HAA7 133 aa15.5■□□□□ 0.07
SMARCD1-204ENST00000547637 TAAR5O14804 337 aa15.49■□□□□ 0.07
SMARCD1-204ENST00000547637 UPK1BO75841 260 aa15.49■□□□□ 0.07
SMARCD1-204ENST00000547637 H2BFSP57053 126 aa15.49■□□□□ 0.07
SMARCD1-204ENST00000547637 SLC25A29Q8N8R3 303 aa15.49■□□□□ 0.07
SMARCD1-204ENST00000547637 TM2D2Q9BX73 214 aa15.49■□□□□ 0.07
SMARCD1-204ENST00000547637 LRCOL1A6NCL2 159 aa15.48■□□□□ 0.07
SMARCD1-204ENST00000547637 ZFP69Q49AA0 526 aa15.48■□□□□ 0.07
SMARCD1-204ENST00000547637 LELP1Q5T871 98 aa15.48■□□□□ 0.07
SMARCD1-204ENST00000547637 Q8N814 137 aa15.48■□□□□ 0.07
SMARCD1-204ENST00000547637 TRAV8-1A0A0A6YYK1 113 aa15.47■□□□□ 0.07
SMARCD1-204ENST00000547637 OR10G9Q8NGN4 311 aa15.47■□□□□ 0.07
SMARCD1-204ENST00000547637 OR10G7Q8NGN6 311 aa15.47■□□□□ 0.07
SMARCD1-204ENST00000547637 RS1O15537 224 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 IGHV3-30P01768 117 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 IGHV3-33P01772 117 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 IGHV3-30-3P0DP02 117 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 IGHV3-30-5P0DP03 117 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 MGST1P10620 155 aaKnown RBP15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 CFAP126Q5VTH2 177 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 ATP6V0E2Q8NHE4 81 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 TVP23CQ96ET8 276 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 GTSF1LQ9H1H1 148 aa15.46■□□□□ 0.07
SMARCD1-204ENST00000547637 EIF3GO75821 320 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMARCD1-204ENST00000547637 LAGE3Q14657 143 aa15.45■□□□□ 0.06
SMARCD1-204ENST00000547637 MARVELD1Q9BSK0 173 aa15.45■□□□□ 0.06
SMARCD1-204ENST00000547637 C1QBP02746 253 aa15.44■□□□□ 0.06
SMARCD1-204ENST00000547637 GNG5P63218 68 aa15.44■□□□□ 0.06
SMARCD1-204ENST00000547637 C5orf17Q8NAS9 161 aa15.44■□□□□ 0.06
SMARCD1-204ENST00000547637 CDC34P49427 236 aaPredicted RBP15.43■□□□□ 0.06
SMARCD1-204ENST00000547637 DEFA1P59665 94 aa15.43■□□□□ 0.06
SMARCD1-204ENST00000547637 DEFA3P59666 94 aa15.43■□□□□ 0.06
SMARCD1-204ENST00000547637 RAB2AP61019 212 aa15.43■□□□□ 0.06
SMARCD1-204ENST00000547637 SMUG1Q53HV7 270 aa15.43■□□□□ 0.06
SMARCD1-204ENST00000547637 PTH2Q96A98 100 aa15.43■□□□□ 0.06
SMARCD1-204ENST00000547637 SGK494Q96LW2 274 aa15.43■□□□□ 0.06
SMARCD1-204ENST00000547637 IGHV3-73A0A0B4J1V6 119 aa15.42■□□□□ 0.06
SMARCD1-204ENST00000547637 HMGB3O15347 200 aaKnown RBP15.42■□□□□ 0.06
SMARCD1-204ENST00000547637 TOR2AQ5JU69 321 aa15.42■□□□□ 0.06
SMARCD1-204ENST00000547637 FLG2Q5D862 2391 aaPredicted RBP15.42■□□□□ 0.06
SMARCD1-204ENST00000547637 TRAV8-3A0A0A6YYJ7 113 aa15.41■□□□□ 0.06
SMARCD1-204ENST00000547637 GCGP01275 180 aa15.41■□□□□ 0.06
SMARCD1-204ENST00000547637 TCRAP04437 139 aa15.41■□□□□ 0.06
SMARCD1-204ENST00000547637 ARL14EPLP0DKL9 152 aa15.41■□□□□ 0.06
SMARCD1-204ENST00000547637 HAMPP81172 84 aa15.41■□□□□ 0.06
SMARCD1-204ENST00000547637 SAPCD1Q5SSQ6 148 aa15.41■□□□□ 0.06
SMARCD1-204ENST00000547637 PSG8Q9UQ74 426 aa15.41■□□□□ 0.06
SMARCD1-204ENST00000547637 J3QL48 77 aa15.4■□□□□ 0.06
SMARCD1-204ENST00000547637 MBP02144 154 aa15.4■□□□□ 0.06
SMARCD1-204ENST00000547637 PLA2G1BP04054 148 aaKnown RBP15.4■□□□□ 0.06
SMARCD1-204ENST00000547637 S100A4P26447 101 aaKnown RBP15.4■□□□□ 0.06
SMARCD1-204ENST00000547637 C9orf85Q96MD7 179 aa15.4■□□□□ 0.06
SMARCD1-204ENST00000547637 WFDC1Q9HC57 220 aa15.4■□□□□ 0.06
SMARCD1-204ENST00000547637 FAT1Q14517 4588 aa15.39■□□□□ 0.05
SMARCD1-204ENST00000547637 STAG3L2P0CL84 134 aa15.39■□□□□ 0.05
SMARCD1-204ENST00000547637 STAG3L3P0CL85 134 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms