RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 IGSF10Q6WRI0 2623 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 TRBV20-1A0A075B6N2 111 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 RPL7P18124 248 aaKnown RBP8.26□□□□□ -1.09
NPAS3-205ENST00000547068 GNLYP22749 145 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 HLA-DMBP28068 263 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 ZNF474Q6S9Z5 364 aaPredicted RBP8.26□□□□□ -1.09
NPAS3-205ENST00000547068 ANKRD29Q8N6D5 301 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 KLK15Q9H2R5 256 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 NHLRC4P0CG21 123 aaPredicted RBP8.26□□□□□ -1.09
NPAS3-205ENST00000547068 LOXP28300 417 aaPredicted RBP8.26□□□□□ -1.09
NPAS3-205ENST00000547068 DLX1P56177 255 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
NPAS3-205ENST00000547068 TMEM155Q4W5P6 130 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 OR11H6Q8NGC7 330 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 CCL17Q92583 94 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 PLEKHB2Q96CS7 222 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 CITED1Q99966 193 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 RAB1BQ9H0U4 201 aa8.26□□□□□ -1.09
NPAS3-205ENST00000547068 C3orf36Q3SXR2 165 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 SHISA2Q6UWI4 295 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 SBSPONQ8IVN8 264 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 SRSF8Q9BRL6 282 aaKnown RBP8.25□□□□□ -1.09
NPAS3-205ENST00000547068 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 TGFAP01135 160 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 CD7P09564 240 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 SRD5A1P18405 259 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 ERCC8Q13216 396 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 IL17RELQ6ZVW7 336 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 NDUFA11Q86Y39 141 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 CFHR4Q92496 578 aa8.25□□□□□ -1.09
NPAS3-205ENST00000547068 TRBV7-9A0A0J9YWB2 115 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 C17orf100A8MU93 164 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 TMEM178BH3BS89 294 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 IGHG4P01861 327 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 ANXA2RQ3ZCQ2 193 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 NEXN-AS1Q8NBZ9 246 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 RHODO00212 210 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 SCGB1C2P0DMR2 95 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 SLC25A16P16260 332 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 ZNF672Q499Z4 452 aaPredicted RBP8.24□□□□□ -1.09
NPAS3-205ENST00000547068 DYNAPQ8N1N2 210 aa8.24□□□□□ -1.09
NPAS3-205ENST00000547068 PCNX1Q96RV3 2341 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 IGKV3D-20A0A0C4DH25 116 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 SNCGO76070 127 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE7O76087 117 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE12FP0CL80 117 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE12GP0CL81 117 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE12IP0CL82 117 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 PRTN3P24158 256 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 NDUFV3P56181 108 aaKnown RBP8.23□□□□□ -1.09
NPAS3-205ENST00000547068 HERV-K104P63124 156 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 GAGE4Q13068 117 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 SMIM2Q9BVW6 85 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 ZFYVE26Q68DK2 2539 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 BUB1B-PAK6H3BSN5 160 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 MFAP4P55083 255 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 ORMDL2Q53FV1 153 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 C22orf34Q6ZV56 151 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 KLHL30-AS1Q8NEE0 82 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 TOMM6Q96B49 74 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 FAM110AQ9BQ89 295 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 SMAD5-AS1Q9Y6J3 95 aa8.23□□□□□ -1.09
NPAS3-205ENST00000547068 TRAV8-2A0A0B4J237 113 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 IGLV1-47P01700 117 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 ADORA2A-AS1P86434 159 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 AJUBAQ96IF1 538 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 KALRNO60229 2985 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 COX6B1P14854 86 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 SPANXN1Q5VSR9 72 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 SMIM20Q8N5G0 67 aa8.22□□□□□ -1.09
NPAS3-205ENST00000547068 RELNP78509 3460 aa8.21□□□□□ -1.09
NPAS3-205ENST00000547068 PRAC2D3DTV9 90 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 SLC25A20O43772 301 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 ASIPP42127 132 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 FAM27E3Q08E93 113 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 BAALCQ8WXS3 180 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 RASL10AQ92737 203 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 C11orf21Q9P2W6 132 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 ROS1P08922 2347 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 IGHV7-4-1A0A0J9YVY3 117 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 CFC1BP0CG36 223 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 CFC1P0CG37 223 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 IFITM1P13164 125 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 RPL32P62910 135 aaKnown RBP8.21□□□□□ -1.1
NPAS3-205ENST00000547068 C10orf126Q8N4M7 172 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 ONECUT1Q9UBC0 465 aa8.21□□□□□ -1.1
NPAS3-205ENST00000547068 IGHV3-23P01764 117 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 COX7A1P24310 79 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 NUP37Q8NFH4 326 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 RNF5Q99942 180 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 KMT2BQ9UMN6 2715 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 226.3 ms