RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PIP4P2Q8N4L2 257 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 MINOS1-NBL1R4GNA1 71 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 HEATR1Q9H583 2144 aaKnown RBP6.8□□□□□ -1.32
ATXN3-216ENST00000545170 PLXNB2O15031 1838 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 SPRY2O43597 315 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 ZFP36L1Q07352 338 aaKnown RBP6.8□□□□□ -1.32
ATXN3-216ENST00000545170 PIK3CD-AS1Q5SR53 167 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 DOCK6Q96HP0 2047 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 CSRP2Q16527 193 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 A0A0G2JMZ2 1700 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 LRRC37A2A6NM11 1700 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 LRRC37AA6NMS7 1700 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 CABIN1Q9Y6J0 2220 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 C11orf86A6NJI1 115 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 NDUFC1O43677 76 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 ANGP03950 147 aaKnown RBP6.79□□□□□ -1.32
ATXN3-216ENST00000545170 SP7Q8TDD2 431 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-216ENST00000545170 SPRR3Q9UBC9 169 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 CASP8AP2Q9UKL3 1982 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 A0A096LPF7 62 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 IL15RAQ13261 267 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 FAM19A5Q7Z5A7 132 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-216ENST00000545170 GTSF1Q8WW33 167 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 SIPA1L1O43166 1804 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 YLPM1P49750 1951 aaKnown RBP6.79□□□□□ -1.32
ATXN3-216ENST00000545170 OOSP1A8MZH6 123 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 FRMD6-AS1P0C7T7 363 aa6.79□□□□□ -1.32
ATXN3-216ENST00000545170 RPL18AQ02543 176 aaKnown RBP6.79□□□□□ -1.32
ATXN3-216ENST00000545170 BRWD1Q9NSI6 2320 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 PINLYPA6NC86 204 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 XGP55808 180 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 PRR20EP86478 221 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 PRR20CP86479 221 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 PRR20DP86480 221 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 PRR20BP86481 221 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 PRR20AP86496 221 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 ZNF503Q96F45 646 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 PRR15LQ9BU68 103 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 SCXQ7RTU7 201 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 C5orf38Q86SI9 138 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 SAP25Q8TEE9 199 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 TNS1Q9HBL0 1735 aaKnown RBP6.78□□□□□ -1.32
ATXN3-216ENST00000545170 ETDCA0A1B0GVM5 59 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 RPL39P62891 51 aaKnown RBP6.78□□□□□ -1.32
ATXN3-216ENST00000545170 NFE4Q86UQ8 179 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 AGPAT4-IT1Q9H0P7 198 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 VPREB3Q9UKI3 123 aa6.78□□□□□ -1.32
ATXN3-216ENST00000545170 MRPL53Q96EL3 112 aaKnown RBP6.78□□□□□ -1.32
ATXN3-216ENST00000545170 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.32
ATXN3-216ENST00000545170 C2orf70A6NJV1 201 aa6.77□□□□□ -1.32
ATXN3-216ENST00000545170 ZNF833PQ6ZTB9 187 aa6.77□□□□□ -1.32
ATXN3-216ENST00000545170 GGNQ86UU5 652 aa6.77□□□□□ -1.32
ATXN3-216ENST00000545170 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-216ENST00000545170 MRPS12O15235 138 aaKnown RBP6.77□□□□□ -1.33
ATXN3-216ENST00000545170 IGKV4-1P06312 121 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 UBE2AP49459 152 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 ESPL1Q14674 2120 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 BLCAPP62952 87 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 ASXL3Q9C0F0 2248 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 PRR19A6NJB7 356 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 LYPD2Q6UXB3 125 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 LYRM9A8MSI8 78 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 C9orf47Q6ZRZ4 202 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 MSRB1Q9NZV6 116 aa6.77□□□□□ -1.33
ATXN3-216ENST00000545170 BPY2O14599 106 aa6.76□□□□□ -1.33
ATXN3-216ENST00000545170 FAM110DQ8TAY7 271 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-216ENST00000545170 POLR2AP24928 1970 aaKnown RBP6.76□□□□□ -1.33
ATXN3-216ENST00000545170 ATP6V0E1O15342 81 aa6.76□□□□□ -1.33
ATXN3-216ENST00000545170 IMUPQ9GZP8 106 aa6.76□□□□□ -1.33
ATXN3-216ENST00000545170 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
ATXN3-216ENST00000545170 WT1-ASQ06250 92 aa6.76□□□□□ -1.33
ATXN3-216ENST00000545170 RNASE6Q93091 150 aaKnown RBP6.76□□□□□ -1.33
ATXN3-216ENST00000545170 TPSG1Q9NRR2 321 aa6.76□□□□□ -1.33
ATXN3-216ENST00000545170 H0Y9J4 135 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 K7ERS5 55 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 FHL1Q13642 323 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 TRPM7Q96QT4 1865 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 H3BUX3 64 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 ZNF672Q499Z4 452 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-216ENST00000545170 MIAQ16674 131 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 FLVCR1-AS1Q8TAF5 88 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 COX7A2LO14548 114 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 CLPSP04118 112 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 BRD3OSQ6XYD6 125 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 Q6ZQT7 251 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 TRBV27A0A0K0K1C4 114 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 TEX22C9J3V5 150 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 PI4KAP42356 2102 aa6.75□□□□□ -1.33
ATXN3-216ENST00000545170 C1orf147Q96MC9 270 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-216ENST00000545170 PDE6GP18545 87 aa6.74□□□□□ -1.33
ATXN3-216ENST00000545170 MBD3L2Q8NHZ7 208 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-216ENST00000545170 GREB1Q4ZG55 1949 aa6.74□□□□□ -1.33
ATXN3-216ENST00000545170 GNLYP22749 145 aa6.74□□□□□ -1.33
ATXN3-216ENST00000545170 KIAA2026Q5HYC2 2103 aa6.74□□□□□ -1.33
ATXN3-216ENST00000545170 RALGAPA2Q2PPJ7 1873 aa6.74□□□□□ -1.33
ATXN3-216ENST00000545170 SOSTDC1Q6X4U4 206 aa6.74□□□□□ -1.33
ATXN3-216ENST00000545170 MYOFQ9NZM1 2061 aa6.74□□□□□ -1.33
ATXN3-216ENST00000545170 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms