RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 C12orf29Q8N999 325 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 OR51A4Q8NGJ6 313 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 SKA2Q8WVK7 121 aaPredicted RBP0.61□□□□□ -2.31
CCDC170-203ENST00000544131 CLEC2BQ92478 149 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 BORCS5Q969J3 196 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ISOC1Q96CN7 298 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 MUCL1Q96DR8 90 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 AIF1LQ9BQI0 150 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 LXNQ9BS40 222 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 JPT1Q9UK76 154 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ZFP30Q9Y2G7 519 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 TPRKBQ9Y3C4 175 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 C3P01024 1663 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ZC3H13Q5T200 1668 aaKnown RBP0.61□□□□□ -2.31
CCDC170-203ENST00000544131 BCL9O00512 1426 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 CHD6Q8TD26 2715 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ARFGEF1Q9Y6D6 1849 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ABCC8Q09428 1581 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 UGGT1Q9NYU2 1555 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 RYR1P21817 5038 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 DNHD1Q96M86 4753 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 TNS1Q9HBL0 1735 aaKnown RBP0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ABCA4P78363 2273 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 CCDC88BA6NC98 1476 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ATP10BO94823 1461 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ERVK-7P63135 1459 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 RANBP2P49792 3224 aaKnown RBP0.6□□□□□ -2.31
CCDC170-203ENST00000544131 EP300Q09472 2414 aaPredicted RBP0.6□□□□□ -2.31
CCDC170-203ENST00000544131 SHROOM2Q13796 1616 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 COL6A3P12111 3177 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 COL6A5A8TX70 2615 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 NEXMIFQ5QGS0 1516 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 CROCC2H7BZ55 1655 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 IQGAP1P46940 1657 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 ZNF142P52746 1687 aaPredicted RBP0.6□□□□□ -2.31
CCDC170-203ENST00000544131 CUL7Q14999 1698 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TOPAZ1Q8N9V7 1692 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 ITSN2Q9NZM3 1697 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 MTORP42345 2549 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 NCOR2Q9Y618 2525 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TRAV36DV7A0A075B6V5 113 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TRBV6-7A0A0A0MS04 114 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 C3orf85A0A1B0GTC6 90 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 ARL5CA6NH57 179 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 C9JAW5 83 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 E7EUB6 86 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 C17orf112F2Z3M2 114 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 F8W1H4 67 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 CCL25O15444 150 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 HYPMO75409 117 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TNFSF15O95150 251 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TFF1P04155 84 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 SLC25A5P05141 298 aaKnown RBP0.6□□□□□ -2.31
CCDC170-203ENST00000544131 PAEPP09466 180 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 SLC25A4P12235 298 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 MIR22HGQ0VDD5 57 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 CIRBPQ14011 172 aaKnown RBP0.6□□□□□ -2.31
CCDC170-203ENST00000544131 DIAPH2-AS1Q14236 149 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TMEM244Q5VVB8 128 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TOMM20LQ6UXN7 152 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 ZCCHC23Q6ZST2 131 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 OR8I2Q8N0Y5 310 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 FAM19A2Q8N3H0 131 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 OR4C6Q8NH72 309 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 MAFIPQ8WZ33 124 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 LZICQ8WZA0 190 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 LINC00052Q96N35 136 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 AP1S3Q96PC3 154 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 ODF3Q96PU9 254 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 OR4C12Q96R67 309 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TP53RKQ96S44 253 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 LINC00467Q9BRT7 94 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 LIMD2Q9BT23 127 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 SMIM3Q9BZL3 60 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 FAM107BQ9H098 131 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 CST11Q9H112 138 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 PRO3102Q9H379 93 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 TCEAL2Q9H3H9 227 aaPredicted RBP0.6□□□□□ -2.31
CCDC170-203ENST00000544131 RASL12Q9NYN1 266 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 CALML5Q9NZT1 146 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 LAMTOR3Q9UHA4 124 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 HIGD1AQ9Y241 93 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 SNURFQ9Y675 71 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 OVOS2A0A0G2JMS6 1433 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 SOGA1O94964 1423 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 PTPRGP23470 1445 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 PEG3Q9GZU2 1588 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 PCLOQ9Y6V0 5065 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 RIF1Q5UIP0 2472 aaKnown RBP0.6□□□□□ -2.31
CCDC170-203ENST00000544131 MAGI2Q86UL8 1455 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 MYO3AQ8NEV4 1616 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 RBBP6Q7Z6E9 1792 aaKnown RBP0.6□□□□□ -2.31
CCDC170-203ENST00000544131 PAPPA2Q9BXP8 1791 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 AKAP11Q9UKA4 1901 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 DOCK11Q5JSL3 2073 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 KNTC1P50748 2209 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 ZFHX4Q86UP3 3567 aa0.6□□□□□ -2.31
CCDC170-203ENST00000544131 DOPEY2Q9Y3R5 2298 aa0.59□□□□□ -2.31
CCDC170-203ENST00000544131 RTL9Q8NET4 1388 aa0.59□□□□□ -2.31
CCDC170-203ENST00000544131 MROH2BQ7Z745 1585 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms