RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 J3QL48 77 aa15.12■□□□□ 0.01
CDKN3-207ENST00000543789 SIX6O95475 246 aa15.12■□□□□ 0.01
CDKN3-207ENST00000543789 TAS2R45P59539 299 aa15.12■□□□□ 0.01
CDKN3-207ENST00000543789 LRRC37A5PQ49AS3 106 aa15.12■□□□□ 0.01
CDKN3-207ENST00000543789 CCDC32Q9BV29 185 aa15.12■□□□□ 0.01
CDKN3-207ENST00000543789 NMES1Q9C002 83 aa15.12■□□□□ 0.01
CDKN3-207ENST00000543789 Q9HAA7 133 aa15.12■□□□□ 0.01
CDKN3-207ENST00000543789 OTORQ9NRC9 128 aa15.12■□□□□ 0.01
CDKN3-207ENST00000543789 PGPA6NDG6 321 aa15.11■□□□□ 0.01
CDKN3-207ENST00000543789 H0YIZ8 118 aa15.11■□□□□ 0.01
CDKN3-207ENST00000543789 KHDC3LQ587J8 217 aa15.11■□□□□ 0.01
CDKN3-207ENST00000543789 OR10J3Q5JRS4 329 aa15.11■□□□□ 0.01
CDKN3-207ENST00000543789 FFAR4Q5NUL3 377 aa15.11■□□□□ 0.01
CDKN3-207ENST00000543789 CMTM2Q8TAZ6 248 aa15.11■□□□□ 0.01
CDKN3-207ENST00000543789 FAM30AQ9NZY2 134 aa15.11■□□□□ 0.01
CDKN3-207ENST00000543789 TYMSP04818 313 aa15.1■□□□□ 0.01
CDKN3-207ENST00000543789 MZT2BQ6NZ67 158 aa15.1■□□□□ 0.01
CDKN3-207ENST00000543789 SDF2L1Q9HCN8 221 aa15.1■□□□□ 0.01
CDKN3-207ENST00000543789 RPH3ALQ9UNE2 315 aa15.1■□□□□ 0.01
CDKN3-207ENST00000543789 FBLL1A6NHQ2 334 aaKnown RBP15.09■□□□□ 0.01
CDKN3-207ENST00000543789 FAM74A1Q5RGS3 127 aa15.09■□□□□ 0.01
CDKN3-207ENST00000543789 SLC25A29Q8N8R3 303 aa15.09■□□□□ 0.01
CDKN3-207ENST00000543789 KCNS1Q96KK3 526 aa15.09■□□□□ 0.01
CDKN3-207ENST00000543789 ATP5SQ99766 215 aa15.09■□□□□ 0.01
CDKN3-207ENST00000543789 PRADC1Q9BSG0 188 aa15.09■□□□□ 0.01
CDKN3-207ENST00000543789 MBD2Q9UBB5 411 aa15.09■□□□□ 0.01
CDKN3-207ENST00000543789 IGHV3-30P01768 117 aa15.08■□□□□ 0
CDKN3-207ENST00000543789 IGHV3-33P01772 117 aa15.08■□□□□ 0
CDKN3-207ENST00000543789 C1QBP02746 253 aa15.08■□□□□ 0
CDKN3-207ENST00000543789 IGHV3-30-3P0DP02 117 aa15.08■□□□□ 0
CDKN3-207ENST00000543789 IGHV3-30-5P0DP03 117 aa15.08■□□□□ 0
CDKN3-207ENST00000543789 TREM1Q9NP99 234 aa15.08■□□□□ 0
CDKN3-207ENST00000543789 F6UZH7 168 aa15.07■□□□□ 0
CDKN3-207ENST00000543789 CYCSP99999 105 aaKnown RBP15.07■□□□□ 0
CDKN3-207ENST00000543789 GOLT1AQ6ZVE7 132 aa15.07■□□□□ 0
CDKN3-207ENST00000543789 SCGB1C1Q8TD33 95 aa15.07■□□□□ 0
CDKN3-207ENST00000543789 ASB13Q8WXK3 278 aa15.07■□□□□ 0
CDKN3-207ENST00000543789 TVP23CQ96ET8 276 aa15.07■□□□□ 0
CDKN3-207ENST00000543789 CIDEAO60543 219 aa15.06■□□□□ 0
CDKN3-207ENST00000543789 EIF3GO75821 320 aaKnown RBP eCLIP15.06■□□□□ 0
CDKN3-207ENST00000543789 ZNF876PQ49A33 203 aa15.06■□□□□ 0
CDKN3-207ENST00000543789 LELP1Q5T871 98 aa15.06■□□□□ 0
CDKN3-207ENST00000543789 ARL6IP6Q8N6S5 226 aa15.06■□□□□ 0
CDKN3-207ENST00000543789 TM2D2Q9BX73 214 aa15.06■□□□□ 0
CDKN3-207ENST00000543789 TRBV6-4A0A1B0GX49 114 aa15.05■□□□□ -0
CDKN3-207ENST00000543789 RHOHQ15669 191 aa15.05■□□□□ -0
CDKN3-207ENST00000543789 CFAP126Q5VTH2 177 aa15.05■□□□□ -0
CDKN3-207ENST00000543789 TRAV8-1A0A0A6YYK1 113 aa15.04■□□□□ -0
CDKN3-207ENST00000543789 RS1O15537 224 aa15.04■□□□□ -0
CDKN3-207ENST00000543789 PLA2G1BP04054 148 aaKnown RBP15.03■□□□□ -0
CDKN3-207ENST00000543789 ASAH1Q13510 395 aa15.03■□□□□ -0
CDKN3-207ENST00000543789 GTSF1LQ9H1H1 148 aa15.03■□□□□ -0
CDKN3-207ENST00000543789 HSPB11Q9Y547 144 aa15.03■□□□□ -0
CDKN3-207ENST00000543789 DNAH8Q96JB1 4490 aa15.03■□□□□ -0
CDKN3-207ENST00000543789 IGHV3-73A0A0B4J1V6 119 aa15.02■□□□□ -0
CDKN3-207ENST00000543789 LAGE3Q14657 143 aa15.02■□□□□ -0
CDKN3-207ENST00000543789 DPPA3Q6W0C5 159 aa15.02■□□□□ -0
CDKN3-207ENST00000543789 PQLC2Q6ZP29 291 aa15.02■□□□□ -0
CDKN3-207ENST00000543789 ATP6V0E2Q8NHE4 81 aa15.02■□□□□ -0
CDKN3-207ENST00000543789 PPP1R1CQ8WVI7 109 aa15.02■□□□□ -0
CDKN3-207ENST00000543789 GNG5P63218 68 aa15.01□□□□□ -0.01
CDKN3-207ENST00000543789 ENKURQ8TC29 256 aa15.01□□□□□ -0.01
CDKN3-207ENST00000543789 SMIM3Q9BZL3 60 aa15.01□□□□□ -0.01
CDKN3-207ENST00000543789 A0A1W2PPV4 95 aa15□□□□□ -0.01
CDKN3-207ENST00000543789 ACOT6Q3I5F7 207 aaPredicted RBP15□□□□□ -0.01
CDKN3-207ENST00000543789 NDFIP1Q9BT67 221 aa15□□□□□ -0.01
CDKN3-207ENST00000543789 A6NHS1 94 aa14.99□□□□□ -0.01
CDKN3-207ENST00000543789 TAAR5O14804 337 aa14.99□□□□□ -0.01
CDKN3-207ENST00000543789 MGST1P10620 155 aaKnown RBP14.99□□□□□ -0.01
CDKN3-207ENST00000543789 H2BFSP57053 126 aa14.99□□□□□ -0.01
CDKN3-207ENST00000543789 WFDC2Q14508 124 aa14.99□□□□□ -0.01
CDKN3-207ENST00000543789 Q6ZSA8 131 aa14.99□□□□□ -0.01
CDKN3-207ENST00000543789 LINC00299Q6ZSB3 139 aa14.99□□□□□ -0.01
CDKN3-207ENST00000543789 SGK494Q96LW2 274 aa14.99□□□□□ -0.01
CDKN3-207ENST00000543789 KRTAP29-1A8MX34 341 aaPredicted RBP14.98□□□□□ -0.01
CDKN3-207ENST00000543789 RPL12P30050 165 aaKnown RBP14.98□□□□□ -0.01
CDKN3-207ENST00000543789 LINC00528Q8N1L1 170 aa14.98□□□□□ -0.01
CDKN3-207ENST00000543789 PTH2Q96A98 100 aa14.98□□□□□ -0.01
CDKN3-207ENST00000543789 C9orf85Q96MD7 179 aa14.98□□□□□ -0.01
CDKN3-207ENST00000543789 C11orf21Q9P2W6 132 aa14.98□□□□□ -0.01
CDKN3-207ENST00000543789 TRAV8-3A0A0A6YYJ7 113 aa14.97□□□□□ -0.01
CDKN3-207ENST00000543789 MPC2O95563 127 aa14.97□□□□□ -0.01
CDKN3-207ENST00000543789 PET100P0DJ07 73 aa14.97□□□□□ -0.01
CDKN3-207ENST00000543789 ZNF80P51504 273 aaPredicted RBP14.97□□□□□ -0.01
CDKN3-207ENST00000543789 DEFB104AQ8WTQ1 72 aa14.97□□□□□ -0.01
CDKN3-207ENST00000543789 S100ZQ8WXG8 99 aa14.97□□□□□ -0.01
CDKN3-207ENST00000543789 SH3BGRL3Q9H299 93 aa14.97□□□□□ -0.01
CDKN3-207ENST00000543789 SERTM2A0A1B0GWG4 89 aa14.96□□□□□ -0.01
CDKN3-207ENST00000543789 PGPEP1LA6NFU8 196 aa14.96□□□□□ -0.01
CDKN3-207ENST00000543789 ZNF506Q5JVG8 444 aa14.96□□□□□ -0.01
CDKN3-207ENST00000543789 Q8N3U1 123 aa14.96□□□□□ -0.01
CDKN3-207ENST00000543789 WFDC1Q9HC57 220 aa14.96□□□□□ -0.01
CDKN3-207ENST00000543789 INMT-MINDY4F8WBC2 141 aa14.95□□□□□ -0.02
CDKN3-207ENST00000543789 LECT2O14960 151 aa14.95□□□□□ -0.02
CDKN3-207ENST00000543789 HMGB3O15347 200 aaKnown RBP14.95□□□□□ -0.02
CDKN3-207ENST00000543789 RAB2AP61019 212 aa14.95□□□□□ -0.02
CDKN3-207ENST00000543789 GCGP01275 180 aa14.94□□□□□ -0.02
CDKN3-207ENST00000543789 OR10G9Q8NGN4 311 aa14.94□□□□□ -0.02
CDKN3-207ENST00000543789 OR10G7Q8NGN6 311 aa14.94□□□□□ -0.02
CDKN3-207ENST00000543789 PSG8Q9UQ74 426 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms