RNA–Protein interactions for RNA: ENST00000543654.1

NPIPB4-218, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 4

Gene NPIPB4, Length 513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-218	ENST00000543654	LINC00310	P59036	64 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	KRTAP10-3	P60369	221 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	HBB	P68871	147 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	RIG	Q13278	110 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	C12orf54	Q6X4T0	127 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	GTSCR1	Q86UQ5	136 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	STH	Q8IWL8	128 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZFAND2A	Q8N6M9	145 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	FER1L6-AS1	Q8NA97	138 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	NUP35	Q8NFH5	326 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	KCNS1	Q96KK3	526 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	GNB1L	Q9BYB4	327 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	MAP6D1	Q9H9H5	199 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TMA7	Q9Y2S6	64 aa	Known RBP	4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654		F6UB75	175 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654		H3BMM0	161 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	S100A6	P06703	90 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZNF705D	P0CH99	300 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZNF705B	P0CI00	300 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	RNASE4	P34096	147 aa	Known RBP	4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	CTRL	P40313	264 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ASIP	P42127	132 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	RAB4B	P61018	213 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	KRTAP24-1	Q3LI83	254 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ACTL10	Q5JWF8	245 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	FAM159A	Q6UWV7	190 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	SMIM15	Q7Z3B0	74 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	FRZB	Q92765	325 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	C20orf144	Q9BQM9	153 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TRAPPC1	Q9Y5R8	145 aa		4.91	□□□□□ -1.62
NPIPB4-218	ENST00000543654		A8MTW9	85 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	SNURFL	B1AK76	121 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	INS	P01308	110 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	S100A4	P26447	101 aa	Known RBP	4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	CRIP1	P50238	77 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	ZNF80	P51504	273 aa	Predicted RBP	4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	CACNG7	P62955	275 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	BEAN1	Q3B7T3	259 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	ODF3L2	Q3SX64	289 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	HIST2H2BD	Q6DRA6	164 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	MRPL54	Q6P161	138 aa	Known RBP	4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	MORN3	Q6PF18	240 aa	Predicted RBP	4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	WFDC9	Q8NEX5	89 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	GTSF1	Q8WW33	167 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	PGLYRP4	Q96LB8	373 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TPPP3	Q9BW30	176 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	C1QTNF4	Q9BXJ3	329 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	CNFN	Q9BYD5	112 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	NAGK	Q9UJ70	344 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	SELENOK	Q9Y6D0	94 aa		4.9	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TENM1	Q9UKZ4	2725 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	COL6A5	A8TX70	2615 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TRGV11	A0A075B6L2	103 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TMSB15B	A0A087X1C1	80 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654		A0A1B0GXF2	115 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	KNCN	A6PVL3	124 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654		J3KRW8	73 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	IGKV3-20	P01619	116 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TRGC2	P03986	189 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	OR5AL1	P0C617	328 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	IGLC6	P0CF74	106 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	PRB4	P10163	310 aa	Predicted RBP	4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	SPINK13	Q1W4C9	94 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TDRG1	Q3Y452	100 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	DNLZ	Q5SXM8	178 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	GDF5OS	Q5U4N7	250 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	GFI1B	Q5VTD9	330 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	AMTN	Q6UX39	209 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TMEM256	Q8N2U0	113 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	KRTAP4-11	Q9BYQ6	195 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	NOTCH3	Q9UM47	2321 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	CUBN	O60494	3623 aa		4.89	□□□□□ -1.63
NPIPB4-218	ENST00000543654	IGHV1OR15-1	A0A075B7D0	117 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654		M0R2Z0	102 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	SNAI2	O43623	268 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	SPINK4	O60575	86 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	APCS	P02743	223 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TRGC1	P0CF51	173 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	GZMB	P10144	247 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	CAMP	P49913	170 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	DEFB1	P60022	68 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	FABP9	Q0Z7S8	132 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	PRR9	Q5T870	116 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	LYZL1	Q6UWQ5	148 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TMEM136	Q6ZRR5	245 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TRPT1	Q86TN4	253 aa	Known RBP	4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	SYT8	Q8NBV8	401 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	LINC00467	Q9BRT7	94 aa		4.88	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TRAV12-3	A0A0B4J271	114 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	IGKV3D-20	A0A0C4DH25	116 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	GRIFIN	A4D1Z8	144 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	ARMS2	P0C7Q2	107 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	HOXA5	P20719	270 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	TWIST1	Q15672	202 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	ANXA2R	Q3ZCQ2	193 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	PRR31	Q5SQ13	230 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	SPANXN1	Q5VSR9	72 aa		4.87	□□□□□ -1.63
NPIPB4-218	ENST00000543654	ZNF493	Q6ZR52	646 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms