RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 NFE4Q86UQ8 179 aa4.94□□□□□ -1.62
NUP43-206ENST00000543637 C5orf17Q8NAS9 161 aa4.94□□□□□ -1.62
NUP43-206ENST00000543637 OR2G3Q8NGZ4 309 aa4.94□□□□□ -1.62
NUP43-206ENST00000543637 RAB24Q969Q5 203 aa4.94□□□□□ -1.62
NUP43-206ENST00000543637 AQP10Q96PS8 301 aa4.94□□□□□ -1.62
NUP43-206ENST00000543637 TNFSF18Q9UNG2 199 aa4.94□□□□□ -1.62
NUP43-206ENST00000543637 LY96Q9Y6Y9 160 aa4.94□□□□□ -1.62
NUP43-206ENST00000543637 TRAV4A0A0B4J268 109 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 F6UZH7 168 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 K7EP13 123 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 EIF3GO75821 320 aaKnown RBP eCLIP4.93□□□□□ -1.62
NUP43-206ENST00000543637 NXPH4O95158 308 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 IFNA7P01567 189 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 TCRAP04437 139 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 GIPP09681 153 aaPredicted RBP4.93□□□□□ -1.62
NUP43-206ENST00000543637 SFTA3P0C7M3 94 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 GYPEP15421 78 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 ATP6V0CP27449 155 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 GCHFRP30047 84 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 PPT1P50897 306 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 GNG5P63218 68 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 FLI1Q01543 452 aaPredicted RBP4.93□□□□□ -1.62
NUP43-206ENST00000543637 LINC01559Q495D7 138 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 SMUG1Q53HV7 270 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 SPATA12Q7Z6I5 190 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 PRNTQ86SH4 94 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 ZNF575Q86XF7 245 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 ZNF479Q96JC4 524 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 EPDR1Q9UM22 224 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 PSG8Q9UQ74 426 aa4.93□□□□□ -1.62
NUP43-206ENST00000543637 FXYD6-FXYD2A0A087WZ82 144 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 TRAV8-1A0A0A6YYK1 113 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 IGHV3-16A0A0C4DH30 117 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 K7EQD1 137 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 GCGP01275 180 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 TYMSP04818 313 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 PFN1P07737 140 aaKnown RBP4.92□□□□□ -1.62
NUP43-206ENST00000543637 ZNF876PQ49A33 203 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 AKR1C8PQ5T2L2 129 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 CYB561D1Q8N8Q1 229 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 NHLRC2Q8NBF2 726 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 SGK494Q96LW2 274 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 PRADC1Q9BSG0 188 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 NKX6-2Q9C056 277 aaPredicted RBP4.92□□□□□ -1.62
NUP43-206ENST00000543637 SH3BGRL3Q9H299 93 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 PGPEP1Q9NXJ5 209 aa4.92□□□□□ -1.62
NUP43-206ENST00000543637 MUC4Q99102 2169 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 TRAV8-6A0A0B4J262 113 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 CTXND1A0A1B0GTU2 59 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 A0A1W2PRE2 83 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 FABP5P3A8MUU1 101 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 CDK2AP2O75956 126 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 S100A4P26447 101 aaKnown RBP4.91□□□□□ -1.62
NUP43-206ENST00000543637 LINC00315P59091 139 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 ERVFC1-1P60608 527 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 C10orf126Q8N4M7 172 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 STOML3Q8TAV4 291 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 SUN5Q8TC36 379 aa4.91□□□□□ -1.62
NUP43-206ENST00000543637 KMT2AQ03164 3969 aa4.9□□□□□ -1.62
NUP43-206ENST00000543637 PSCAO43653 123 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 UBE2G1P62253 170 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 RGS21Q2M5E4 152 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 RPL7L1Q6DKI1 246 aaKnown RBP4.9□□□□□ -1.63
NUP43-206ENST00000543637 MAPKAPK5-AS1Q8N8E1 139 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 TMEM75Q8N9X5 138 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 OR2T35Q8NGX2 323 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 TVP23CQ96ET8 276 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 KRTAP17-1Q9BYP8 105 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 MSRB1Q9NZV6 116 aa4.9□□□□□ -1.63
NUP43-206ENST00000543637 VPS13DQ5THJ4 4388 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 TRBV6-4A0A1B0GX49 114 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 A8MWV9 139 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 RS1O15537 224 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 GATA1P15976 413 aaPredicted RBP4.89□□□□□ -1.63
NUP43-206ENST00000543637 UBE2G2P60604 165 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 RHOHQ15669 191 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 LGALSLQ3ZCW2 172 aaPredicted RBP4.89□□□□□ -1.63
NUP43-206ENST00000543637 Q5BKY6 102 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 OR10J3Q5JRS4 329 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 HIST1H2BAQ96A08 127 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 PTH2Q96A98 100 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 KRTAP1-5Q9BYS1 174 aa4.89□□□□□ -1.63
NUP43-206ENST00000543637 IGHV3-73A0A0B4J1V6 119 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 TRAV34A0A0B4J273 112 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 IGHV3-38A0A0C4DH36 116 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 RNF222A6NCQ9 220 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 PGPEP1LA6NFU8 196 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 ARPC5O15511 151 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 CRYGDP07320 174 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 DNAH10OSP0CZ25 163 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 MGST1P10620 155 aaKnown RBP4.88□□□□□ -1.63
NUP43-206ENST00000543637 ASIPP42127 132 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 ZNF80P51504 273 aaPredicted RBP4.88□□□□□ -1.63
NUP43-206ENST00000543637 C4orf48Q5BLP8 95 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 CFAP126Q5VTH2 177 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 CST9LP1Q5W188 147 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 WFDC10BQ8IUB3 73 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 SLC25A29Q8N8R3 303 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 SYT8Q8NBV8 401 aa4.88□□□□□ -1.63
NUP43-206ENST00000543637 ATP6V0E2Q8NHE4 81 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms