RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	IBA57	Q5T440	356 aa	Known RBP	7.77	□□□□□ -1.17
DDB1-222	ENST00000543627	EIF5AL1	Q6IS14	154 aa	Known RBP	7.77	□□□□□ -1.17
DDB1-222	ENST00000543627	POM121L12	Q8N7R1	296 aa		7.77	□□□□□ -1.17
DDB1-222	ENST00000543627	TMEM75	Q8N9X5	138 aa		7.77	□□□□□ -1.17
DDB1-222	ENST00000543627	C15orf53	Q8NAA6	179 aa		7.77	□□□□□ -1.17
DDB1-222	ENST00000543627	NKX6-2	Q9C056	277 aa	Predicted RBP	7.77	□□□□□ -1.17
DDB1-222	ENST00000543627	SDF2L1	Q9HCN8	221 aa		7.77	□□□□□ -1.17
DDB1-222	ENST00000543627		C9JCJ5	164 aa		7.76	□□□□□ -1.17
DDB1-222	ENST00000543627	SPINK4	O60575	86 aa		7.76	□□□□□ -1.17
DDB1-222	ENST00000543627	IGLV2-11	P01706	119 aa		7.76	□□□□□ -1.17
DDB1-222	ENST00000543627	AKR1C3	P42330	323 aa		7.76	□□□□□ -1.17
DDB1-222	ENST00000543627	MBD3L1	Q8WWY6	194 aa		7.76	□□□□□ -1.17
DDB1-222	ENST00000543627	HIST1H2BA	Q96A08	127 aa		7.76	□□□□□ -1.17
DDB1-222	ENST00000543627	KRTAP17-1	Q9BYP8	105 aa		7.76	□□□□□ -1.17
DDB1-222	ENST00000543627	ARL2-SNX15	V9GYD0	113 aa		7.76	□□□□□ -1.17
DDB1-222	ENST00000543627	TRGV4	A0A0C4DH28	118 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	ORM1	P02763	201 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	TYMS	P04818	313 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	SFTA3	P0C7M3	94 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	DPPA3	Q6W0C5	159 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	SLC51B	Q86UW2	128 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	LINC00612	Q8N6U2	182 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	KCNS1	Q96KK3	526 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	GNG13	Q9P2W3	67 aa		7.75	□□□□□ -1.17
DDB1-222	ENST00000543627	FBLL1	A6NHQ2	334 aa	Known RBP	7.74	□□□□□ -1.17
DDB1-222	ENST00000543627	TEX46	H3BTG2	121 aa		7.74	□□□□□ -1.17
DDB1-222	ENST00000543627	PFN1	P07737	140 aa	Known RBP	7.74	□□□□□ -1.17
DDB1-222	ENST00000543627	S100A4	P26447	101 aa	Known RBP	7.74	□□□□□ -1.17
DDB1-222	ENST00000543627	CCL20	P78556	96 aa		7.74	□□□□□ -1.17
DDB1-222	ENST00000543627	NHLRC2	Q8NBF2	726 aa		7.74	□□□□□ -1.17
DDB1-222	ENST00000543627	SPX	Q9BT56	116 aa		7.74	□□□□□ -1.17
DDB1-222	ENST00000543627	TMSB15B	A0A087X1C1	80 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627		A0A096LPF7	62 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	IGHV3-16	A0A0C4DH30	117 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	SCO2	A0A1W2PP80	73 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	FABP5P3	A8MUU1	101 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627		M0R036	132 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627		M0R2P5	195 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	PAX4	O43316	350 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	NKX2-5	P52952	324 aa	Predicted RBP	7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	CCL18	P55774	89 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	LGALS9B	Q3B8N2	356 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627		Q86TA4	180 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	OR4C5	Q8NGB2	326 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	FMC1	Q96HJ9	113 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	C11orf21	Q9P2W6	132 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	NACA	E9PAV3	2078 aa		7.73	□□□□□ -1.17
DDB1-222	ENST00000543627	SULT1A2	P50226	295 aa		7.72	□□□□□ -1.17
DDB1-222	ENST00000543627	RAB5C	P51148	216 aa		7.72	□□□□□ -1.17
DDB1-222	ENST00000543627	TDRG1	Q3Y452	100 aa		7.72	□□□□□ -1.17
DDB1-222	ENST00000543627	C9orf62	Q8N4C0	152 aa		7.72	□□□□□ -1.17
DDB1-222	ENST00000543627	ZC2HC1A	Q96GY0	325 aa		7.72	□□□□□ -1.17
DDB1-222	ENST00000543627	ZNF479	Q96JC4	524 aa		7.72	□□□□□ -1.17
DDB1-222	ENST00000543627	HHLA3	Q9XRX5	114 aa		7.72	□□□□□ -1.17
DDB1-222	ENST00000543627	ZFP30	Q9Y2G7	519 aa		7.72	□□□□□ -1.17
DDB1-222	ENST00000543627	IGHV3-73	A0A0B4J1V6	119 aa		7.71	□□□□□ -1.18
DDB1-222	ENST00000543627	GRIFIN	A4D1Z8	144 aa		7.71	□□□□□ -1.18
DDB1-222	ENST00000543627		B4DEV8	164 aa		7.71	□□□□□ -1.18
DDB1-222	ENST00000543627	SH2D1A	O60880	128 aa		7.71	□□□□□ -1.18
DDB1-222	ENST00000543627	RNF212	Q495C1	297 aa		7.71	□□□□□ -1.18
DDB1-222	ENST00000543627	ZNF876P	Q49A33	203 aa		7.71	□□□□□ -1.18
DDB1-222	ENST00000543627	ALKAL2	Q6UX46	152 aa		7.71	□□□□□ -1.18
DDB1-222	ENST00000543627	VPS13D	Q5THJ4	4388 aa		7.71	□□□□□ -1.18
DDB1-222	ENST00000543627	KMT2A	Q03164	3969 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	IGKV3D-20	A0A0C4DH25	116 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	ASIP	P42127	132 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	CRIP1	P50238	77 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	FHL2	Q14192	279 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	FAM162B	Q5T6X4	162 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	PRR27	Q6MZM9	219 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	BAGE2	Q86Y30	109 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	RASL10A	Q92737	203 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	VSIG2	Q96IQ7	327 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	MANBAL	Q9NQG1	85 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	PRO0255	Q9UI72	69 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	BOLA1	Q9Y3E2	137 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	LINC00588	Q9Y4M8	146 aa		7.7	□□□□□ -1.18
DDB1-222	ENST00000543627	PGPEP1L	A6NFU8	196 aa		7.69	□□□□□ -1.18
DDB1-222	ENST00000543627	IFNA1	P01562	189 aa		7.69	□□□□□ -1.18
DDB1-222	ENST00000543627	CRYBA4	P53673	196 aa		7.69	□□□□□ -1.18
DDB1-222	ENST00000543627	SLA	Q13239	276 aa		7.69	□□□□□ -1.18
DDB1-222	ENST00000543627	ESRG	Q1W209	222 aa		7.69	□□□□□ -1.18
DDB1-222	ENST00000543627	PCNP	Q8WW12	178 aa	Known RBP	7.69	□□□□□ -1.18
DDB1-222	ENST00000543627	TCEAL7	Q9BRU2	100 aa		7.69	□□□□□ -1.18
DDB1-222	ENST00000543627	ICOS	Q9Y6W8	199 aa		7.69	□□□□□ -1.18
DDB1-222	ENST00000543627	TRAV4	A0A0B4J268	109 aa		7.68	□□□□□ -1.18
DDB1-222	ENST00000543627		H3BVH4	76 aa		7.68	□□□□□ -1.18
DDB1-222	ENST00000543627	LTA	P01374	205 aa		7.68	□□□□□ -1.18
DDB1-222	ENST00000543627	S100A9	P06702	114 aa	Known RBP	7.68	□□□□□ -1.18
DDB1-222	ENST00000543627	MGST1	P10620	155 aa	Known RBP	7.68	□□□□□ -1.18
DDB1-222	ENST00000543627	GYPE	P15421	78 aa		7.68	□□□□□ -1.18
DDB1-222	ENST00000543627	SST	P61278	116 aa		7.68	□□□□□ -1.18
DDB1-222	ENST00000543627	C18orf15	Q96N68	181 aa		7.68	□□□□□ -1.18
DDB1-222	ENST00000543627	MED9	Q9NWA0	146 aa		7.68	□□□□□ -1.18
DDB1-222	ENST00000543627	TRAV1-1	A0A0B4J248	108 aa		7.67	□□□□□ -1.18
DDB1-222	ENST00000543627	RAB19	A4D1S5	217 aa		7.67	□□□□□ -1.18
DDB1-222	ENST00000543627	KRBOX1	C9JBD0	128 aa		7.67	□□□□□ -1.18
DDB1-222	ENST00000543627	ARMS2	P0C7Q2	107 aa		7.67	□□□□□ -1.18
DDB1-222	ENST00000543627	RNASE3	P12724	160 aa	Known RBP	7.67	□□□□□ -1.18
DDB1-222	ENST00000543627	RPL35	P42766	123 aa	Known RBP	7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms