RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 SLC25A5P05141 298 aaKnown RBP3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 OR10J4P0C629 311 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 RPL12P30050 165 aaKnown RBP3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 RNASE4P34096 147 aaKnown RBP3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 LEPP41159 167 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 DAZ2Q13117 558 aaKnown RBP3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 BTN1A1Q13410 526 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 OR5I1Q13606 314 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 ANXA2RQ3ZCQ2 193 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 Q5BKY6 102 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 FAM122CQ6P4D5 195 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 Q6ZTI0 123 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 BLNKQ8WV28 456 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 LINC00477Q96M19 166 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 ATP5SQ99766 215 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 PYGO2Q9BRQ0 406 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 PAXXQ9BUH6 204 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 CHAC1Q9BUX1 264 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 SMIM3Q9BZL3 60 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 OR51M1Q9H341 326 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 BATF3Q9NR55 127 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 ZNF492Q9P255 531 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 MBD2Q9UBB5 411 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 TP53TG3Q9ULZ0 132 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 PRELID1Q9Y255 219 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 KLF12Q9Y4X4 402 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 TIMM9Q9Y5J7 89 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 ALG5Q9Y673 324 aa3.19□□□□□ -1.9
NPIPB3-211ENST00000542953 TRAV9-2A0A087WT02 112 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 GAGE12BA1L429 117 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 SPINK4O60575 86 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 GAGE7O76087 117 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 NMBP08949 121 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 GAGE12FP0CL80 117 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 GAGE12GP0CL81 117 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 GAGE12IP0CL82 117 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 ZNF138P52744 262 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 DEFA1P59665 94 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 DEFA3P59666 94 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 RANP62826 216 aaKnown RBP3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 FFAR4Q5NUL3 377 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 Q6ZRU5 148 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 Q8TAT8 98 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 TVP23CQ96ET8 276 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 VSIG2Q96IQ7 327 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 MRPL32Q9BYC8 188 aaKnown RBP3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 GSN-AS1Q9NRJ2 163 aa3.18□□□□□ -1.9
NPIPB3-211ENST00000542953 IGHV1OR15-1A0A075B7D0 117 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 TRBV7-9A0A0J9YWB2 115 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 A0A0U1RQV1 116 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 DIRC3C9JPN6 131 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 C17orf112F2Z3M2 114 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 G3V3Q6 166 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 OR7C2O60412 319 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 IGLV2-11P01706 119 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 GPX1P07203 203 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 TCL1AP56279 114 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 RAB2AP61019 212 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 RPL37AP61513 92 aaKnown RBP3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 ZNF266Q14584 549 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 ACOT6Q3I5F7 207 aaPredicted RBP3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 TMEM78Q5T7P6 136 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 CCDC28AQ8IWP9 274 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 EIF4E3Q8N5X7 224 aaKnown RBP3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 SUN5Q8TC36 379 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 AAMDCQ9H7C9 122 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 KCNIP2Q9NS61 270 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 LY96Q9Y6Y9 160 aa3.17□□□□□ -1.9
NPIPB3-211ENST00000542953 TRAV8-1A0A0A6YYK1 113 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 RBAKDNA6NC62 111 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 RNF222A6NCQ9 220 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 PGPA6NDG6 321 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 SNURFLB1AK76 121 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 HMGB3O15347 200 aaKnown RBP3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 PTTG1O95997 202 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 PET100P0DJ07 73 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 ATP6V0CP27449 155 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 UBE2L3P68036 154 aaKnown RBP3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 IBA57Q5T440 356 aaKnown RBP3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 Q6AWC8 147 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 C10orf126Q8N4M7 172 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 ZNF680Q8NEM1 530 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 OR2G3Q8NGZ4 309 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 ANAPC16Q96DE5 110 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 AQP10Q96PS8 301 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 OTORQ9NRC9 128 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 MRPL16Q9NX20 251 aaKnown RBP3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 CRCT1Q9UGL9 99 aa3.16□□□□□ -1.9
NPIPB3-211ENST00000542953 TRGV2A0A075B6R0 118 aa3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 TRGV1A0A0A0MS02 117 aa3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 GNRH2O43555 120 aa3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 PSCAO43653 123 aa3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 IGHV3-53P01767 116 aa3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 GIPP09681 153 aaPredicted RBP3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 STAG3L2P0CL84 134 aa3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 STAG3L3P0CL85 134 aa3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 EVI2AP22794 236 aa3.15□□□□□ -1.91
NPIPB3-211ENST00000542953 ZNF80P51504 273 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms