RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 NHLRC2Q8NBF2 726 aa11.78□□□□□ -0.52
PPP1CA-210ENST00000542876 OTORQ9NRC9 128 aa11.78□□□□□ -0.52
PPP1CA-210ENST00000542876 DMBT1Q9UGM3 2413 aaPredicted RBP11.77□□□□□ -0.52
PPP1CA-210ENST00000542876 TRAV21A0A0B4J279 112 aa11.77□□□□□ -0.53
PPP1CA-210ENST00000542876 PPT1P50897 306 aa11.77□□□□□ -0.53
PPP1CA-210ENST00000542876 HERC1Q15751 4861 aa11.76□□□□□ -0.53
PPP1CA-210ENST00000542876 FAT1Q14517 4588 aa11.76□□□□□ -0.53
PPP1CA-210ENST00000542876 PGPA6NDG6 321 aa11.76□□□□□ -0.53
PPP1CA-210ENST00000542876 GNRH2O43555 120 aa11.76□□□□□ -0.53
PPP1CA-210ENST00000542876 PET100P0DJ07 73 aa11.76□□□□□ -0.53
PPP1CA-210ENST00000542876 PPP1R1CQ8WVI7 109 aa11.76□□□□□ -0.53
PPP1CA-210ENST00000542876 MBD2Q9UBB5 411 aa11.76□□□□□ -0.53
PPP1CA-210ENST00000542876 IGHV3-16A0A0C4DH30 117 aa11.75□□□□□ -0.53
PPP1CA-210ENST00000542876 IGHV3-38A0A0C4DH36 116 aa11.75□□□□□ -0.53
PPP1CA-210ENST00000542876 GOLT1AQ6ZVE7 132 aa11.75□□□□□ -0.53
PPP1CA-210ENST00000542876 KCNS1Q96KK3 526 aa11.75□□□□□ -0.53
PPP1CA-210ENST00000542876 SDF2L1Q9HCN8 221 aa11.75□□□□□ -0.53
PPP1CA-210ENST00000542876 BOLA1Q9Y3E2 137 aa11.75□□□□□ -0.53
PPP1CA-210ENST00000542876 HSPB11Q9Y547 144 aa11.75□□□□□ -0.53
PPP1CA-210ENST00000542876 IGLV5-52A0A0A0MRZ9 124 aa11.74□□□□□ -0.53
PPP1CA-210ENST00000542876 A0A1W2PPV4 95 aa11.74□□□□□ -0.53
PPP1CA-210ENST00000542876 TIRAPP58753 221 aa11.74□□□□□ -0.53
PPP1CA-210ENST00000542876 SMIM3Q9BZL3 60 aa11.74□□□□□ -0.53
PPP1CA-210ENST00000542876 TREM1Q9NP99 234 aa11.74□□□□□ -0.53
PPP1CA-210ENST00000542876 ALG5Q9Y673 324 aa11.74□□□□□ -0.53
PPP1CA-210ENST00000542876 TRAV8-6A0A0B4J262 113 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 LOC100131303A0A0U1RQF7 123 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 F6UZH7 168 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 FAM229AH3BQW9 127 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 SMR3BP02814 79 aaPredicted RBP11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 TYMSP04818 313 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 GATA1P15976 413 aaPredicted RBP11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 ACOT6Q3I5F7 207 aaPredicted RBP11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 PQLC2Q6ZP29 291 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 ARL6IP6Q8N6S5 226 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 NTN5Q8WTR8 489 aaPredicted RBP11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 ASB13Q8WXK3 278 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
PPP1CA-210ENST00000542876 FBLL1A6NHQ2 334 aaKnown RBP11.72□□□□□ -0.53
PPP1CA-210ENST00000542876 SSNA1O43805 119 aa11.72□□□□□ -0.53
PPP1CA-210ENST00000542876 EIF3GO75821 320 aaKnown RBP eCLIP11.72□□□□□ -0.53
PPP1CA-210ENST00000542876 MPC2O95563 127 aa11.72□□□□□ -0.53
PPP1CA-210ENST00000542876 RPL12P30050 165 aaKnown RBP11.72□□□□□ -0.53
PPP1CA-210ENST00000542876 H2BFSP57053 126 aa11.72□□□□□ -0.53
PPP1CA-210ENST00000542876 LINC01556Q5JQF7 62 aa11.72□□□□□ -0.53
PPP1CA-210ENST00000542876 PRADC1Q9BSG0 188 aa11.72□□□□□ -0.53
PPP1CA-210ENST00000542876 CIDEAO60543 219 aa11.71□□□□□ -0.53
PPP1CA-210ENST00000542876 ZNF876PQ49A33 203 aa11.71□□□□□ -0.53
PPP1CA-210ENST00000542876 OR10J3Q5JRS4 329 aa11.71□□□□□ -0.53
PPP1CA-210ENST00000542876 TRAV8-1A0A0A6YYK1 113 aa11.7□□□□□ -0.54
PPP1CA-210ENST00000542876 RHOHQ15669 191 aa11.7□□□□□ -0.54
PPP1CA-210ENST00000542876 Q9HAA7 133 aa11.7□□□□□ -0.54
PPP1CA-210ENST00000542876 SERTM2A0A1B0GWG4 89 aa11.69□□□□□ -0.54
PPP1CA-210ENST00000542876 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
PPP1CA-210ENST00000542876 SLC25A29Q8N8R3 303 aa11.69□□□□□ -0.54
PPP1CA-210ENST00000542876 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
PPP1CA-210ENST00000542876 TMEM70Q9BUB7 260 aa11.69□□□□□ -0.54
PPP1CA-210ENST00000542876 TRBV6-4A0A1B0GX49 114 aa11.68□□□□□ -0.54
PPP1CA-210ENST00000542876 LRCOL1A6NCL2 159 aa11.68□□□□□ -0.54
PPP1CA-210ENST00000542876 K7EQM0 130 aa11.68□□□□□ -0.54
PPP1CA-210ENST00000542876 RAB2AP61019 212 aa11.68□□□□□ -0.54
PPP1CA-210ENST00000542876 GNG5P63218 68 aa11.68□□□□□ -0.54
PPP1CA-210ENST00000542876 OR10G9Q8NGN4 311 aa11.68□□□□□ -0.54
PPP1CA-210ENST00000542876 OR10G7Q8NGN6 311 aa11.68□□□□□ -0.54
PPP1CA-210ENST00000542876 TAAR5O14804 337 aa11.67□□□□□ -0.54
PPP1CA-210ENST00000542876 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
PPP1CA-210ENST00000542876 HAMPP81172 84 aa11.67□□□□□ -0.54
PPP1CA-210ENST00000542876 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
PPP1CA-210ENST00000542876 Q6ZNX1 250 aa11.67□□□□□ -0.54
PPP1CA-210ENST00000542876 Q6ZSN1 163 aa11.67□□□□□ -0.54
PPP1CA-210ENST00000542876 Q8N814 137 aa11.67□□□□□ -0.54
PPP1CA-210ENST00000542876 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
PPP1CA-210ENST00000542876 IGHV3-73A0A0B4J1V6 119 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 RS1O15537 224 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 IGHV3-30P01768 117 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 IGHV3-30-5P0DP03 117 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 ZFP69Q49AA0 526 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 LELP1Q5T871 98 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 WFDC1Q9HC57 220 aa11.66□□□□□ -0.54
PPP1CA-210ENST00000542876 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
PPP1CA-210ENST00000542876 MGST1P10620 155 aaKnown RBP11.65□□□□□ -0.54
PPP1CA-210ENST00000542876 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.54
PPP1CA-210ENST00000542876 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.54
PPP1CA-210ENST00000542876 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
PPP1CA-210ENST00000542876 SH3BGRL3Q9H299 93 aa11.65□□□□□ -0.54
PPP1CA-210ENST00000542876 GCGP01275 180 aa11.64□□□□□ -0.55
PPP1CA-210ENST00000542876 TCRAP04437 139 aa11.64□□□□□ -0.55
PPP1CA-210ENST00000542876 CDC34P49427 236 aaPredicted RBP11.64□□□□□ -0.55
PPP1CA-210ENST00000542876 GTSF1LQ9H1H1 148 aa11.64□□□□□ -0.55
PPP1CA-210ENST00000542876 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
PPP1CA-210ENST00000542876 MYCBP2O75592 4640 aa11.63□□□□□ -0.55
PPP1CA-210ENST00000542876 LAGE3Q14657 143 aa11.63□□□□□ -0.55
PPP1CA-210ENST00000542876 SMUG1Q53HV7 270 aa11.63□□□□□ -0.55
PPP1CA-210ENST00000542876 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
PPP1CA-210ENST00000542876 PSG8Q9UQ74 426 aa11.63□□□□□ -0.55
PPP1CA-210ENST00000542876 SRRM2Q9UQ35 2752 aaKnown RBP11.63□□□□□ -0.55
PPP1CA-210ENST00000542876 ZNF80P51504 273 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms