RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 LEPP41159 167 aa8.5□□□□□ -1.05
SRGAP1-205ENST00000542841 COX19Q49B96 90 aa8.5□□□□□ -1.05
SRGAP1-205ENST00000542841 TSKUQ8WUA8 353 aa8.5□□□□□ -1.05
SRGAP1-205ENST00000542841 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
SRGAP1-205ENST00000542841 SH2D1AO60880 128 aa8.49□□□□□ -1.05
SRGAP1-205ENST00000542841 CXCL1P09341 107 aa8.49□□□□□ -1.05
SRGAP1-205ENST00000542841 HLA-DRB4P13762 266 aa8.49□□□□□ -1.05
SRGAP1-205ENST00000542841 CRIP1P50238 77 aa8.49□□□□□ -1.05
SRGAP1-205ENST00000542841 DEFB131AP59861 70 aa8.49□□□□□ -1.05
SRGAP1-205ENST00000542841 Q6AWC8 147 aa8.49□□□□□ -1.05
SRGAP1-205ENST00000542841 SELENOKQ9Y6D0 94 aa8.49□□□□□ -1.05
SRGAP1-205ENST00000542841 HLA-DRB4X5D2U9 266 aa8.49□□□□□ -1.05
SRGAP1-205ENST00000542841 TRAV21A0A0B4J279 112 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 IZUMO1RA6ND01 250 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 KLLNB2CW77 178 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 OR11H12B2RN74 326 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 F6UB75 175 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 TYMSP04818 313 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 ZFAND2AQ8N6M9 145 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 NAT8BQ9UHF3 227 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 URGCP-MRPS24S4R325 110 aa8.48□□□□□ -1.05
SRGAP1-205ENST00000542841 A0A1W2PPQ1 181 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 TMEM189A5PLL7 270 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 NUPR2A6NF83 97 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 AMBPP02760 352 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 GPX1P07203 203 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 ZNF705DP0CH99 300 aaPredicted RBP8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 ZNF705BP0CI00 300 aaPredicted RBP8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 RAB5AP20339 215 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 CDKN1BP46527 198 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 ZNF80P51504 273 aaPredicted RBP8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 ODF3L2Q3SX64 289 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 DEFB125Q8N687 156 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 OR2D3Q8NGH3 330 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 FAM210BQ96KR6 192 aa8.47□□□□□ -1.05
SRGAP1-205ENST00000542841 H3BMM0 161 aa8.46□□□□□ -1.06
SRGAP1-205ENST00000542841 FAM3BP58499 235 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-205ENST00000542841 GDF5OSQ5U4N7 250 aa8.46□□□□□ -1.06
SRGAP1-205ENST00000542841 ATP5L2Q7Z4Y8 100 aa8.46□□□□□ -1.06
SRGAP1-205ENST00000542841 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-205ENST00000542841 SRD5A3Q9H8P0 318 aa8.46□□□□□ -1.06
SRGAP1-205ENST00000542841 TGIF2-C20orf24A0A0A6YYL0 155 aa8.45□□□□□ -1.06
SRGAP1-205ENST00000542841 CD7P09564 240 aa8.45□□□□□ -1.06
SRGAP1-205ENST00000542841 PRB4P10163 310 aaPredicted RBP8.45□□□□□ -1.06
SRGAP1-205ENST00000542841 DEFB1P60022 68 aa8.45□□□□□ -1.06
SRGAP1-205ENST00000542841 ACTL10Q5JWF8 245 aa8.45□□□□□ -1.06
SRGAP1-205ENST00000542841 AMTNQ6UX39 209 aa8.45□□□□□ -1.06
SRGAP1-205ENST00000542841 NEU1Q99519 415 aa8.45□□□□□ -1.06
SRGAP1-205ENST00000542841 C20orf144Q9BQM9 153 aa8.45□□□□□ -1.06
SRGAP1-205ENST00000542841 A0A1B0GW15 77 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 C7orf71A4D174 169 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 HIGD1CA8MV81 97 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 ORM1P02763 201 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 NUTF2P61970 127 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 DNLZQ5SXM8 178 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 WDR73Q6P4I2 378 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 CEMP1Q6PRD7 247 aaPredicted RBP8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 KCNS1Q96KK3 526 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 WFDC10AQ9H1F0 79 aa8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
SRGAP1-205ENST00000542841 RYR1P21817 5038 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 HECTD4Q9Y4D8 3996 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 AGRNO00468 2067 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 KNCNA6PVL3 124 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 CA1P00915 261 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 MT-ND6P03923 174 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 S100A8P05109 93 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 MED14OSP0DP75 135 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 RPS10P46783 165 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 PRR9Q5T870 116 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 TRPT1Q86TN4 253 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 STHQ8IWL8 128 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 GTSF1Q8WW33 167 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 BORCS7Q96B45 105 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
SRGAP1-205ENST00000542841 IGKV3D-20A0A0C4DH25 116 aa8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 F2Z2F3 143 aa8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 IGLC6P0CF74 106 aa8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 RNASE4P34096 147 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 CTRLP40313 264 aa8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 TDRG1Q3Y452 100 aa8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 OVOL2Q9BRP0 275 aa8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 GNB1LQ9BYB4 327 aa8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 CNFNQ9BYD5 112 aa8.42□□□□□ -1.06
SRGAP1-205ENST00000542841 A0A0J9YWU9 116 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 A0A1B0GUT8 65 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 C1orf196B1AJZ1 125 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 HLA-DQA1P01909 254 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 TCL1AP56279 114 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 RIGQ13278 110 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 GFI1BQ5VTD9 330 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 FAM159AQ6UWV7 190 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 FER1L6-AS1Q8NA97 138 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms