RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 GAGE12FP0CL80 117 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 GAGE12GP0CL81 117 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 GAGE12IP0CL82 117 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 P0DMU3 169 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 FAM231AP0DMU4 169 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 FAM231CP0DMU5 169 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 HTN3P15516 51 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 ZNF80P51504 273 aaPredicted RBP9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 UBE2G1P62253 170 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 CCL20P78556 96 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 Q86TA4 180 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 TMEM183AQ8IXX5 376 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 MDFICQ9P1T7 246 aa9.69□□□□□ -0.86
TNFSF13B-206ENST00000542136 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
TNFSF13B-206ENST00000542136 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
TNFSF13B-206ENST00000542136 IGHV3-16A0A0C4DH30 117 aa9.68□□□□□ -0.86
TNFSF13B-206ENST00000542136 BLOC1S1P78537 153 aa9.68□□□□□ -0.86
TNFSF13B-206ENST00000542136 SLAQ13239 276 aa9.68□□□□□ -0.86
TNFSF13B-206ENST00000542136 RNF212Q495C1 297 aa9.68□□□□□ -0.86
TNFSF13B-206ENST00000542136 TMEM88Q6PEY1 159 aa9.68□□□□□ -0.86
TNFSF13B-206ENST00000542136 PTH2Q96A98 100 aa9.68□□□□□ -0.86
TNFSF13B-206ENST00000542136 GNRH2O43555 120 aa9.67□□□□□ -0.86
TNFSF13B-206ENST00000542136 IFNA1P01562 189 aa9.67□□□□□ -0.86
TNFSF13B-206ENST00000542136 AKR1C3P42330 323 aa9.67□□□□□ -0.86
TNFSF13B-206ENST00000542136 LYPD6BQ8NI32 183 aa9.67□□□□□ -0.86
TNFSF13B-206ENST00000542136 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
TNFSF13B-206ENST00000542136 GNG13Q9P2W3 67 aa9.67□□□□□ -0.86
TNFSF13B-206ENST00000542136 A0A1B0GV50 99 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 M0R2P5 195 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 PDE6DO43924 150 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 TYMSP04818 313 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 FAM3BP58499 235 aaPredicted RBP9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 ZNF674Q2M3X9 581 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 PIK3CD-AS1Q5SR53 167 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 DNLZQ5SXM8 178 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 FAM162BQ5T6X4 162 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 C11orf21Q9P2W6 132 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 NAGKQ9UJ70 344 aa9.66□□□□□ -0.86
TNFSF13B-206ENST00000542136 CIDEAO60543 219 aa9.65□□□□□ -0.86
TNFSF13B-206ENST00000542136 HOXA5P20719 270 aa9.65□□□□□ -0.86
TNFSF13B-206ENST00000542136 MEF2BQ02080 365 aaPredicted RBP9.65□□□□□ -0.86
TNFSF13B-206ENST00000542136 ALKAL2Q6UX46 152 aa9.65□□□□□ -0.86
TNFSF13B-206ENST00000542136 POM121L12Q8N7R1 296 aa9.65□□□□□ -0.86
TNFSF13B-206ENST00000542136 ZC2HC1AQ96GY0 325 aa9.65□□□□□ -0.86
TNFSF13B-206ENST00000542136 VAX2Q9UIW0 290 aa9.65□□□□□ -0.86
TNFSF13B-206ENST00000542136 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
TNFSF13B-206ENST00000542136 CRIP1P50238 77 aa9.64□□□□□ -0.87
TNFSF13B-206ENST00000542136 OR5I1Q13606 314 aa9.64□□□□□ -0.87
TNFSF13B-206ENST00000542136 SMIM12Q96EX1 92 aa9.64□□□□□ -0.87
TNFSF13B-206ENST00000542136 C9orf85Q96MD7 179 aa9.64□□□□□ -0.87
TNFSF13B-206ENST00000542136 IGKV3D-20A0A0C4DH25 116 aa9.63□□□□□ -0.87
TNFSF13B-206ENST00000542136 NDUFS6O75380 124 aaKnown RBP9.63□□□□□ -0.87
TNFSF13B-206ENST00000542136 BCL2P10415 239 aa9.63□□□□□ -0.87
TNFSF13B-206ENST00000542136 NKX2-5P52952 324 aaPredicted RBP9.63□□□□□ -0.87
TNFSF13B-206ENST00000542136 BAGE2Q86Y30 109 aa9.63□□□□□ -0.87
TNFSF13B-206ENST00000542136 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
TNFSF13B-206ENST00000542136 PRO0255Q9UI72 69 aa9.63□□□□□ -0.87
TNFSF13B-206ENST00000542136 TRAV26-1A0A087WT03 109 aa9.62□□□□□ -0.87
TNFSF13B-206ENST00000542136 TRAV4A0A0B4J268 109 aa9.62□□□□□ -0.87
TNFSF13B-206ENST00000542136 KRBOX1C9JBD0 128 aa9.62□□□□□ -0.87
TNFSF13B-206ENST00000542136 ORM1P02763 201 aa9.62□□□□□ -0.87
TNFSF13B-206ENST00000542136 RNASE3P12724 160 aaKnown RBP9.62□□□□□ -0.87
TNFSF13B-206ENST00000542136 RPL35P42766 123 aaKnown RBP9.62□□□□□ -0.87
TNFSF13B-206ENST00000542136 LINC01559Q495D7 138 aa9.62□□□□□ -0.87
TNFSF13B-206ENST00000542136 IL36BQ9NZH7 164 aa9.62□□□□□ -0.87
TNFSF13B-206ENST00000542136 B4DEV8 164 aa9.61□□□□□ -0.87
TNFSF13B-206ENST00000542136 SH2D1AO60880 128 aa9.61□□□□□ -0.87
TNFSF13B-206ENST00000542136 ASIPP42127 132 aa9.61□□□□□ -0.87
TNFSF13B-206ENST00000542136 FHL2Q14192 279 aa9.61□□□□□ -0.87
TNFSF13B-206ENST00000542136 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
TNFSF13B-206ENST00000542136 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
TNFSF13B-206ENST00000542136 STARD9Q9P2P6 4700 aa9.61□□□□□ -0.87
TNFSF13B-206ENST00000542136 MUC4Q99102 2169 aa9.61□□□□□ -0.87
TNFSF13B-206ENST00000542136 CXCL1P09341 107 aa9.6□□□□□ -0.87
TNFSF13B-206ENST00000542136 CCL18P55774 89 aa9.6□□□□□ -0.87
TNFSF13B-206ENST00000542136 ZNF575Q86XF7 245 aa9.6□□□□□ -0.87
TNFSF13B-206ENST00000542136 VSIG2Q96IQ7 327 aa9.6□□□□□ -0.87
TNFSF13B-206ENST00000542136 BOLA1Q9Y3E2 137 aa9.6□□□□□ -0.87
TNFSF13B-206ENST00000542136 KMT2CQ8NEZ4 4911 aaKnown RBP9.6□□□□□ -0.87
TNFSF13B-206ENST00000542136 RBFOX3A6NFN3 312 aa9.59□□□□□ -0.87
TNFSF13B-206ENST00000542136 TMEM250H0YL14 139 aa9.59□□□□□ -0.87
TNFSF13B-206ENST00000542136 PAX4O43316 350 aa9.59□□□□□ -0.87
TNFSF13B-206ENST00000542136 NUDT3O95989 172 aa9.59□□□□□ -0.87
TNFSF13B-206ENST00000542136 S100A4P26447 101 aaKnown RBP9.59□□□□□ -0.87
TNFSF13B-206ENST00000542136 CRYBA4P53673 196 aa9.59□□□□□ -0.87
TNFSF13B-206ENST00000542136 OR4C5Q8NGB2 326 aa9.59□□□□□ -0.87
TNFSF13B-206ENST00000542136 BIN3Q9NQY0 253 aa9.59□□□□□ -0.87
TNFSF13B-206ENST00000542136 TRGV4A0A0C4DH28 118 aa9.58□□□□□ -0.88
TNFSF13B-206ENST00000542136 MED14OSP0DP75 135 aa9.58□□□□□ -0.88
TNFSF13B-206ENST00000542136 ZNF479Q96JC4 524 aa9.58□□□□□ -0.88
TNFSF13B-206ENST00000542136 DERL1Q9BUN8 251 aa9.58□□□□□ -0.88
TNFSF13B-206ENST00000542136 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
TNFSF13B-206ENST00000542136 MED9Q9NWA0 146 aa9.58□□□□□ -0.88
TNFSF13B-206ENST00000542136 A0A0J9YY99 117 aa9.57□□□□□ -0.88
TNFSF13B-206ENST00000542136 PGPEP1LA6NFU8 196 aa9.57□□□□□ -0.88
TNFSF13B-206ENST00000542136 A8MWV9 139 aa9.57□□□□□ -0.88
TNFSF13B-206ENST00000542136 RS1O15537 224 aa9.57□□□□□ -0.88
TNFSF13B-206ENST00000542136 IGLV2-8P01709 118 aa9.57□□□□□ -0.88
TNFSF13B-206ENST00000542136 GNG4P50150 75 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms