RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 KIR3DS1Q14943 382 aa13.12□□□□□ -0.31
SPIDR-227ENST00000541342 Q96MF0 132 aa13.12□□□□□ -0.31
SPIDR-227ENST00000541342 OR9G4Q8NGQ1 327 aa13.12□□□□□ -0.31
SPIDR-227ENST00000541342 HSD52Q0P140 79 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 ZFAND3Q9H8U3 227 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 IGKV2D-26A0A0A0MRZ7 120 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 SIVA1O15304 175 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 IGHV4-59P01825 116 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 GATA1P15976 413 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-227ENST00000541342 BMI1P35226 326 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 NMUP48645 174 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
SPIDR-227ENST00000541342 EEF1AKMT3Q96AZ1 226 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 GAGE10A6NGK3 116 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 ORM1P02763 201 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 RNF182Q8N6D2 247 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 HHLA3Q9XRX5 114 aa13.11□□□□□ -0.31
SPIDR-227ENST00000541342 H3BUT2 72 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 SAP30O75446 220 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 SCGB2A1O75556 95 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 PPIFP30405 207 aaKnown RBP13.1□□□□□ -0.31
SPIDR-227ENST00000541342 FBLL1A6NHQ2 334 aaKnown RBP13.1□□□□□ -0.31
SPIDR-227ENST00000541342 J3QKU1 62 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 FSHBP01225 129 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 EVI2AP22794 236 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 ODF1Q14990 250 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
SPIDR-227ENST00000541342 HELZ2Q9BYK8 2649 aaKnown RBP13.1□□□□□ -0.31
SPIDR-227ENST00000541342 TRBV7-1A0A0A6YYK4 115 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 ATP5G2Q06055 141 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 VPS25Q9BRG1 176 aa13.1□□□□□ -0.31
SPIDR-227ENST00000541342 A6NDN8 102 aa13.09□□□□□ -0.31
SPIDR-227ENST00000541342 IL17RELQ6ZVW7 336 aa13.09□□□□□ -0.31
SPIDR-227ENST00000541342 TTTY13Q9BZ97 58 aa13.09□□□□□ -0.31
SPIDR-227ENST00000541342 C11orf21Q9P2W6 132 aa13.09□□□□□ -0.31
SPIDR-227ENST00000541342 TNFRSF6BO95407 300 aa13.09□□□□□ -0.31
SPIDR-227ENST00000541342 TRGV3P03979 118 aa13.09□□□□□ -0.31
SPIDR-227ENST00000541342 LEPP41159 167 aa13.09□□□□□ -0.31
SPIDR-227ENST00000541342 AKAP9Q99996 3911 aa13.09□□□□□ -0.31
SPIDR-227ENST00000541342 A0A0G2JLM5 398 aa13.08□□□□□ -0.31
SPIDR-227ENST00000541342 LINC01559Q495D7 138 aa13.08□□□□□ -0.31
SPIDR-227ENST00000541342 MAP1LC3AQ9H492 121 aa13.08□□□□□ -0.31
SPIDR-227ENST00000541342 CLPSL1A2RUU4 121 aa13.08□□□□□ -0.32
SPIDR-227ENST00000541342 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
SPIDR-227ENST00000541342 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
SPIDR-227ENST00000541342 OR4X2Q8NGF9 303 aa13.08□□□□□ -0.32
SPIDR-227ENST00000541342 PDZD2O15018 2839 aa13.08□□□□□ -0.32
SPIDR-227ENST00000541342 FABP5P3A8MUU1 101 aa13.08□□□□□ -0.32
SPIDR-227ENST00000541342 IGKV3D-20A0A0C4DH25 116 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 K7EP34 96 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 BUB3O43684 328 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 RAB37Q96AX2 223 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 ITPR3Q14573 2671 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 IGLV2-18A0A075B6J9 118 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 FCER1GP30273 86 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 CREBBPQ92793 2442 aa13.07□□□□□ -0.32
SPIDR-227ENST00000541342 TM4SF20Q53R12 229 aa13.06□□□□□ -0.32
SPIDR-227ENST00000541342 KLK15Q9H2R5 256 aa13.06□□□□□ -0.32
SPIDR-227ENST00000541342 IGHV3-66A0A0C4DH42 116 aa13.06□□□□□ -0.32
SPIDR-227ENST00000541342 COTL1Q14019 142 aa13.06□□□□□ -0.32
SPIDR-227ENST00000541342 TMEM95Q3KNT9 176 aa13.06□□□□□ -0.32
SPIDR-227ENST00000541342 Q6ZQT7 251 aa13.06□□□□□ -0.32
SPIDR-227ENST00000541342 TRBV12-3P01733 135 aa13.05□□□□□ -0.32
SPIDR-227ENST00000541342 LCNL1Q6ZST4 164 aa13.05□□□□□ -0.32
SPIDR-227ENST00000541342 BRI3O95415 125 aa13.05□□□□□ -0.32
SPIDR-227ENST00000541342 CFHR3Q02985 330 aa13.05□□□□□ -0.32
SPIDR-227ENST00000541342 GTF2H5Q6ZYL4 71 aa13.05□□□□□ -0.32
SPIDR-227ENST00000541342 K7ERU9 68 aa13.04□□□□□ -0.32
SPIDR-227ENST00000541342 C9orf139Q6ZV77 190 aa13.04□□□□□ -0.32
SPIDR-227ENST00000541342 TMEM158Q8WZ71 300 aa13.04□□□□□ -0.32
SPIDR-227ENST00000541342 NXT2Q9NPJ8 142 aaKnown RBP13.04□□□□□ -0.32
SPIDR-227ENST00000541342 A0A1W2PPM0 123 aa13.04□□□□□ -0.32
SPIDR-227ENST00000541342 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
SPIDR-227ENST00000541342 FXYD2P54710 66 aa13.04□□□□□ -0.32
SPIDR-227ENST00000541342 WFDC11Q8NEX6 87 aa13.04□□□□□ -0.32
SPIDR-227ENST00000541342 IGHV3OR16-13A0A075B7E8 117 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 IGHV3-74A0A0B4J1X5 117 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 TRAV8-2A0A0B4J237 113 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 OR2K2Q8NGT1 345 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 AGPAT4-IT1Q9H0P7 198 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 RBAKDNA6NC62 111 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 H3BUA1 57 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 ATP6V0BQ99437 205 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
SPIDR-227ENST00000541342 ZNF207O43670 478 aaKnown RBP13.03□□□□□ -0.32
SPIDR-227ENST00000541342 PF4V1P10720 104 aa13.02□□□□□ -0.32
SPIDR-227ENST00000541342 TRAV26-2A0A0B4J265 109 aa13.02□□□□□ -0.33
SPIDR-227ENST00000541342 IGHV3-11P01762 117 aa13.02□□□□□ -0.33
SPIDR-227ENST00000541342 ARL3P36405 182 aa13.02□□□□□ -0.33
SPIDR-227ENST00000541342 Q6YL49 198 aa13.02□□□□□ -0.33
SPIDR-227ENST00000541342 NRACQ8N912 160 aa13.02□□□□□ -0.33
SPIDR-227ENST00000541342 CSTL1Q9H114 145 aa13.02□□□□□ -0.33
SPIDR-227ENST00000541342 Q8N8P6 123 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 ITPR2Q14571 2701 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 IGHV3-49A0A0A0MS15 119 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 IGKCP01834 107 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 PRSS1P07477 247 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms