RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 PIFOQ8TCI5 191 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 MYO7BQ6PIF6 2116 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 A4D1N5 150 aa11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 CTRLP40313 264 aa11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 ORMDL1Q9P0S3 153 aa11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 YLPM1P49750 1951 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 GATA3P23771 443 aa11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 TRAV26-1A0A087WT03 109 aa11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 H0YGX0 51 aa11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 I3L2K1 104 aa11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 CDK2AP2O75956 126 aa11.74□□□□□ -0.53
SMARCA4-207ENST00000541122 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 Q71RC1 249 aaPredicted RBP11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 DOCK8Q8NF50 2099 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 TRBV10-2A0A0K0K1G8 114 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 RBM3P98179 157 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 LY6G6EA0A0G2JKS1 128 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 ATP5G1P05496 136 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 FOXE3Q13461 319 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 U3KQA8 63 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 ZDBF2Q9HCK1 2354 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 INTS1Q8N201 2190 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 A0A1B0GXF2 115 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 ODF1Q14990 250 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 MUSTN1Q8IVN3 82 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 IGFBPL1Q8WX77 278 aa11.73□□□□□ -0.53
SMARCA4-207ENST00000541122 KLHL30-AS1Q8NEE0 82 aa11.72□□□□□ -0.53
SMARCA4-207ENST00000541122 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
SMARCA4-207ENST00000541122 C19orf71A6NCJ1 209 aa11.72□□□□□ -0.53
SMARCA4-207ENST00000541122 TOMM6Q96B49 74 aa11.72□□□□□ -0.53
SMARCA4-207ENST00000541122 DIDO1Q9BTC0 2240 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-207ENST00000541122 MRAPQ8TCY5 172 aa11.72□□□□□ -0.53
SMARCA4-207ENST00000541122 LHBP01229 141 aa11.72□□□□□ -0.53
SMARCA4-207ENST00000541122 RPL35AP18077 110 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-207ENST00000541122 SHANK1Q9Y566 2161 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 ZFP2Q6ZN57 461 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 SLC25A29Q8N8R3 303 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 ANAPC1Q9H1A4 1944 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 IGKV1-17P01599 117 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 Q9H8V8 135 aa11.71□□□□□ -0.53
SMARCA4-207ENST00000541122 TINCRA0A1B0GVN0 87 aa11.71□□□□□ -0.54
SMARCA4-207ENST00000541122 C22orf46C9J442 243 aa11.71□□□□□ -0.54
SMARCA4-207ENST00000541122 MED14OSP0DP75 135 aa11.71□□□□□ -0.54
SMARCA4-207ENST00000541122 IGLV2-14P01704 120 aa11.71□□□□□ -0.54
SMARCA4-207ENST00000541122 IGFL3Q6UXB1 125 aa11.71□□□□□ -0.54
SMARCA4-207ENST00000541122 TIMM17AQ99595 171 aa11.71□□□□□ -0.54
SMARCA4-207ENST00000541122 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
SMARCA4-207ENST00000541122 WNK2Q9Y3S1 2297 aa11.7□□□□□ -0.54
SMARCA4-207ENST00000541122 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
SMARCA4-207ENST00000541122 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
SMARCA4-207ENST00000541122 LINC01619G3V211 115 aa11.7□□□□□ -0.54
SMARCA4-207ENST00000541122 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
SMARCA4-207ENST00000541122 K7EIM0 57 aa11.7□□□□□ -0.54
SMARCA4-207ENST00000541122 XCL2Q9UBD3 114 aa11.7□□□□□ -0.54
SMARCA4-207ENST00000541122 LY6HO94772 140 aa11.69□□□□□ -0.54
SMARCA4-207ENST00000541122 FRMD6-AS1P0C7T7 363 aa11.69□□□□□ -0.54
SMARCA4-207ENST00000541122 TNRC6AQ8NDV7 1962 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-207ENST00000541122 GNRH2O43555 120 aa11.69□□□□□ -0.54
SMARCA4-207ENST00000541122 P0C879 139 aa11.69□□□□□ -0.54
SMARCA4-207ENST00000541122 SUMO4Q6EEV6 95 aa11.69□□□□□ -0.54
SMARCA4-207ENST00000541122 NPBQ8NG41 125 aa11.69□□□□□ -0.54
SMARCA4-207ENST00000541122 MSRB1Q9NZV6 116 aa11.69□□□□□ -0.54
SMARCA4-207ENST00000541122 TANC1Q9C0D5 1861 aa11.68□□□□□ -0.54
SMARCA4-207ENST00000541122 LINC01356Q8N9X3 169 aa11.68□□□□□ -0.54
SMARCA4-207ENST00000541122 RPL39LQ96EH5 51 aaKnown RBP11.68□□□□□ -0.54
SMARCA4-207ENST00000541122 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
SMARCA4-207ENST00000541122 SPTBN1Q01082 2364 aaKnown RBP11.68□□□□□ -0.54
SMARCA4-207ENST00000541122 A0A1B0GX51 115 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 WI2-2373I1.2A0A1W2PRP0 233 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 H3BQ85 93 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 RBX1P62877 108 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 IGLV11-55A0A075B6I3 123 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 ZNF561-AS1K7EIQ3 104 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 NDUFC2O95298 119 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 DEFB130BP0DP73 79 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 DEFB130AP0DP74 79 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 NSUN5P1Q3KNT7 163 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 RUSC1-AS1Q66K80 236 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 TTTY13Q9BZ97 58 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 PLXNB3Q9ULL4 1909 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 MSMBP08118 114 aa11.67□□□□□ -0.54
SMARCA4-207ENST00000541122 NXPH4O95158 308 aa11.66□□□□□ -0.54
SMARCA4-207ENST00000541122 C11orf44Q8N8P7 122 aa11.66□□□□□ -0.54
SMARCA4-207ENST00000541122 IGKV1OR2-108A0A075B7D4 117 aa11.66□□□□□ -0.54
SMARCA4-207ENST00000541122 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
SMARCA4-207ENST00000541122 Q6ZUT4 128 aa11.66□□□□□ -0.54
SMARCA4-207ENST00000541122 F6UB75 175 aa11.66□□□□□ -0.54
SMARCA4-207ENST00000541122 ODF3L1Q8IXM7 274 aa11.66□□□□□ -0.54
SMARCA4-207ENST00000541122 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
SMARCA4-207ENST00000541122 IGLV2-8P01709 118 aa11.65□□□□□ -0.55
SMARCA4-207ENST00000541122 RNF152Q8N8N0 203 aa11.65□□□□□ -0.55
SMARCA4-207ENST00000541122 COL4A6Q14031 1691 aa11.64□□□□□ -0.55
SMARCA4-207ENST00000541122 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
SMARCA4-207ENST00000541122 C9orf47Q6ZRZ4 202 aa11.64□□□□□ -0.55
SMARCA4-207ENST00000541122 CTSZQ9UBR2 303 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms