RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 LENEPQ9Y5L5 61 aa17.91■□□□□ 0.46
CHFR-218ENST00000540963 DNAH8Q96JB1 4490 aa17.91■□□□□ 0.46
CHFR-218ENST00000540963 FAM159AQ6UWV7 190 aa17.9■□□□□ 0.46
CHFR-218ENST00000540963 Q8TAT8 98 aa17.9■□□□□ 0.46
CHFR-218ENST00000540963 ATP5SQ99766 215 aa17.9■□□□□ 0.46
CHFR-218ENST00000540963 PAXXQ9BUH6 204 aa17.9■□□□□ 0.46
CHFR-218ENST00000540963 OR4C5Q8NGB2 326 aa17.89■□□□□ 0.45
CHFR-218ENST00000540963 DEFB104AQ8WTQ1 72 aa17.89■□□□□ 0.45
CHFR-218ENST00000540963 CSN1S1P47710 185 aa17.88■□□□□ 0.45
CHFR-218ENST00000540963 TMEM183BQ1AE95 376 aa17.88■□□□□ 0.45
CHFR-218ENST00000540963 TDRG1Q3Y452 100 aa17.88■□□□□ 0.45
CHFR-218ENST00000540963 Q6ZSA8 131 aa17.88■□□□□ 0.45
CHFR-218ENST00000540963 TMEM183AQ8IXX5 376 aa17.88■□□□□ 0.45
CHFR-218ENST00000540963 SMIM3Q9BZL3 60 aa17.88■□□□□ 0.45
CHFR-218ENST00000540963 PPT1P50897 306 aa17.87■□□□□ 0.45
CHFR-218ENST00000540963 SERTAD4-AS1Q5TG53 156 aa17.87■□□□□ 0.45
CHFR-218ENST00000540963 TRAV8-6A0A0B4J262 113 aa17.86■□□□□ 0.45
CHFR-218ENST00000540963 M0R2P5 195 aa17.86■□□□□ 0.45
CHFR-218ENST00000540963 SSNA1O43805 119 aa17.86■□□□□ 0.45
CHFR-218ENST00000540963 RPL12P30050 165 aaKnown RBP17.86■□□□□ 0.45
CHFR-218ENST00000540963 NHLRC2Q8NBF2 726 aa17.86■□□□□ 0.45
CHFR-218ENST00000540963 MBD2Q9UBB5 411 aa17.86■□□□□ 0.45
CHFR-218ENST00000540963 PFN1P07737 140 aaKnown RBP17.85■□□□□ 0.45
CHFR-218ENST00000540963 FFAR4Q5NUL3 377 aa17.85■□□□□ 0.45
CHFR-218ENST00000540963 LOC100131303A0A0U1RQF7 123 aa17.84■□□□□ 0.45
CHFR-218ENST00000540963 RANP62826 216 aaKnown RBP17.84■□□□□ 0.45
CHFR-218ENST00000540963 LAGE3Q14657 143 aa17.84■□□□□ 0.45
CHFR-218ENST00000540963 TMED6Q8WW62 240 aa17.84■□□□□ 0.45
CHFR-218ENST00000540963 C17orf112F2Z3M2 114 aa17.83■□□□□ 0.44
CHFR-218ENST00000540963 GATA1P15976 413 aaPredicted RBP17.83■□□□□ 0.44
CHFR-218ENST00000540963 LINC00528Q8N1L1 170 aa17.83■□□□□ 0.44
CHFR-218ENST00000540963 TM2D2Q9BX73 214 aa17.83■□□□□ 0.44
CHFR-218ENST00000540963 Q9HAA7 133 aa17.83■□□□□ 0.44
CHFR-218ENST00000540963 KCNIP2Q9NS61 270 aa17.83■□□□□ 0.44
CHFR-218ENST00000540963 OR7C2O60412 319 aa17.82■□□□□ 0.44
CHFR-218ENST00000540963 DEFA1P59665 94 aa17.82■□□□□ 0.44
CHFR-218ENST00000540963 DEFA3P59666 94 aa17.82■□□□□ 0.44
CHFR-218ENST00000540963 CIDEAO60543 219 aa17.81■□□□□ 0.44
CHFR-218ENST00000540963 SYT8Q8NBV8 401 aa17.81■□□□□ 0.44
CHFR-218ENST00000540963 IGHV3-16A0A0C4DH30 117 aa17.8■□□□□ 0.44
CHFR-218ENST00000540963 OR10J3Q5JRS4 329 aa17.8■□□□□ 0.44
CHFR-218ENST00000540963 ALG5Q9Y673 324 aa17.8■□□□□ 0.44
CHFR-218ENST00000540963 UBE2L3P68036 154 aaKnown RBP17.79■□□□□ 0.44
CHFR-218ENST00000540963 LELP1Q5T871 98 aa17.79■□□□□ 0.44
CHFR-218ENST00000540963 DIRC3C9JPN6 131 aa17.78■□□□□ 0.44
CHFR-218ENST00000540963 FBLL1A6NHQ2 334 aaKnown RBP17.77■□□□□ 0.44
CHFR-218ENST00000540963 PET100P0DJ07 73 aa17.77■□□□□ 0.44
CHFR-218ENST00000540963 SCGB1C1Q8TD33 95 aa17.77■□□□□ 0.44
CHFR-218ENST00000540963 PRADC1Q9BSG0 188 aa17.77■□□□□ 0.44
CHFR-218ENST00000540963 NAGKQ9UJ70 344 aa17.77■□□□□ 0.44
CHFR-218ENST00000540963 TRBV6-4A0A1B0GX49 114 aa17.76■□□□□ 0.43
CHFR-218ENST00000540963 GNRH2O43555 120 aa17.76■□□□□ 0.43
CHFR-218ENST00000540963 RAB2AP61019 212 aa17.76■□□□□ 0.43
CHFR-218ENST00000540963 SLC25A29Q8N8R3 303 aa17.76■□□□□ 0.43
CHFR-218ENST00000540963 TRAV21A0A0B4J279 112 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 IGHV3-30P01768 117 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 IGHV3-33P01772 117 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 IGHV3-30-3P0DP02 117 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 IGHV3-30-5P0DP03 117 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 RHOHQ15669 191 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 Q5BKY6 102 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 TVP23CQ96ET8 276 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 KCNS1Q96KK3 526 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 BATF3Q9NR55 127 aa17.75■□□□□ 0.43
CHFR-218ENST00000540963 HMCN2Q8NDA2 5059 aa17.74■□□□□ 0.43
CHFR-218ENST00000540963 KHDC3LQ587J8 217 aa17.74■□□□□ 0.43
CHFR-218ENST00000540963 SDF2L1Q9HCN8 221 aa17.74■□□□□ 0.43
CHFR-218ENST00000540963 PGPA6NDG6 321 aa17.73■□□□□ 0.43
CHFR-218ENST00000540963 TYMSP04818 313 aa17.73■□□□□ 0.43
CHFR-218ENST00000540963 ARL6IP6Q8N6S5 226 aa17.73■□□□□ 0.43
CHFR-218ENST00000540963 HYLS1Q96M11 299 aa17.73■□□□□ 0.43
CHFR-218ENST00000540963 GTSF1LQ9H1H1 148 aa17.73■□□□□ 0.43
CHFR-218ENST00000540963 SH3BGRL3Q9H299 93 aa17.73■□□□□ 0.43
CHFR-218ENST00000540963 TRAV8-3A0A0A6YYJ7 113 aa17.72■□□□□ 0.43
CHFR-218ENST00000540963 WFDC2Q14508 124 aa17.72■□□□□ 0.43
CHFR-218ENST00000540963 OTORQ9NRC9 128 aa17.72■□□□□ 0.43
CHFR-218ENST00000540963 HMGB3O15347 200 aaKnown RBP17.71■□□□□ 0.43
CHFR-218ENST00000540963 OXTP01178 125 aa17.71■□□□□ 0.43
CHFR-218ENST00000540963 TAS2R45P59539 299 aa17.71■□□□□ 0.43
CHFR-218ENST00000540963 ACOT6Q3I5F7 207 aaPredicted RBP17.7■□□□□ 0.42
CHFR-218ENST00000540963 RS1O15537 224 aa17.69■□□□□ 0.42
CHFR-218ENST00000540963 ZNF876PQ49A33 203 aa17.69■□□□□ 0.42
CHFR-218ENST00000540963 TOR2AQ5JU69 321 aa17.69■□□□□ 0.42
CHFR-218ENST00000540963 FAM74A1Q5RGS3 127 aa17.69■□□□□ 0.42
CHFR-218ENST00000540963 CFAP126Q5VTH2 177 aa17.69■□□□□ 0.42
CHFR-218ENST00000540963 ATP6V0E2Q8NHE4 81 aa17.69■□□□□ 0.42
CHFR-218ENST00000540963 CMTM2Q8TAZ6 248 aa17.69■□□□□ 0.42
CHFR-218ENST00000540963 COX11Q9Y6N1 276 aa17.69■□□□□ 0.42
CHFR-218ENST00000540963 TRAV8-1A0A0A6YYK1 113 aa17.68■□□□□ 0.42
CHFR-218ENST00000540963 GNG5P63218 68 aa17.68■□□□□ 0.42
CHFR-218ENST00000540963 PQLC2Q6ZP29 291 aa17.68■□□□□ 0.42
CHFR-218ENST00000540963 OR10G9Q8NGN4 311 aa17.68■□□□□ 0.42
CHFR-218ENST00000540963 OR10G7Q8NGN6 311 aa17.68■□□□□ 0.42
CHFR-218ENST00000540963 ASB13Q8WXK3 278 aa17.68■□□□□ 0.42
CHFR-218ENST00000540963 LRP1Q07954 4544 aaKnown RBP17.68■□□□□ 0.42
CHFR-218ENST00000540963 MGST1P10620 155 aaKnown RBP17.67■□□□□ 0.42
CHFR-218ENST00000540963 GOLT1AQ6ZVE7 132 aa17.67■□□□□ 0.42
CHFR-218ENST00000540963 SCXQ7RTU7 201 aa17.67■□□□□ 0.42
CHFR-218ENST00000540963 AQP10Q96PS8 301 aa17.67■□□□□ 0.42
CHFR-218ENST00000540963 TREM1Q9NP99 234 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms