RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TRAV8-2A0A0B4J237 113 aa6.27□□□□□ -1.41
CHD4-208ENST00000540960 TRAV21A0A0B4J279 112 aa6.27□□□□□ -1.41
CHD4-208ENST00000540960 IGHV3-66A0A0C4DH42 116 aa6.27□□□□□ -1.41
CHD4-208ENST00000540960 IGKV2D-40P01614 121 aaPredicted RBP6.27□□□□□ -1.41
CHD4-208ENST00000540960 TRBV12-3P01733 135 aa6.27□□□□□ -1.41
CHD4-208ENST00000540960 APOHP02749 345 aaPredicted RBP6.27□□□□□ -1.41
CHD4-208ENST00000540960 SMIM6P0DI80 62 aa6.27□□□□□ -1.41
CHD4-208ENST00000540960 CBLN1P23435 193 aa6.27□□□□□ -1.41
CHD4-208ENST00000540960 LEPP41159 167 aa6.27□□□□□ -1.41
CHD4-208ENST00000540960 TMEM95Q3KNT9 176 aa6.27□□□□□ -1.41
CHD4-208ENST00000540960 IGHV3-49A0A0A0MS15 119 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 TMEM213A2RRL7 107 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 SOCS3O14543 225 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 PHOX2AO14813 284 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 SH2D1AO60880 128 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 ORM1P02763 201 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 RAB4AP20338 218 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 TCL1AP56279 114 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 SYNJ2BPP57105 145 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 CACNG7P62955 275 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 LINC01559Q495D7 138 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 KHDC1LQ5JSQ8 128 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 DNLZQ5SXM8 178 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 TMEM136Q6ZRR5 245 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 BAGE3Q86Y29 109 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 OR8A1Q8NGG7 326 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 DYNLRB2Q8TF09 96 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 SGK494Q96LW2 274 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 VGLL1Q99990 258 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 AGPAT4-IT1Q9H0P7 198 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 SIGLEC8Q9NYZ4 499 aa6.26□□□□□ -1.41
CHD4-208ENST00000540960 PKHD1P08F94 4074 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 IGHV4OR15-8A0A075B7B6 117 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 IGHV3OR16-13A0A075B7E8 117 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 A0A087WW49 117 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 IGHV3-74A0A0B4J1X5 117 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 A0A1B0GXF2 115 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 OR4C46A6NHA9 309 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 C2orf70A6NJV1 201 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 PPBPP02775 128 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 MRPL54Q6P161 138 aaKnown RBP6.25□□□□□ -1.41
CHD4-208ENST00000540960 FER1L6-AS1Q8NA97 138 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 GATD1Q8NB37 220 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 KLHL30-AS1Q8NEE0 82 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 OR11H1Q8NG94 326 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 OR9G4Q8NGQ1 327 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 OR2K2Q8NGT1 345 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 KCNS1Q96KK3 526 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 PGLYRP4Q96LB8 373 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 ZMAT4Q9H898 229 aa6.25□□□□□ -1.41
CHD4-208ENST00000540960 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
CHD4-208ENST00000540960 ZNF705FA8MVS1 300 aaPredicted RBP6.24□□□□□ -1.41
CHD4-208ENST00000540960 K7EQG2 157 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 GPX1P07203 203 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 ESDP10768 282 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 PMCHP20382 165 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 CTRLP40313 264 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 FOXI2Q6ZQN5 318 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 LCNL1Q6ZST4 164 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 HIST3H2BBQ8N257 126 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 RNF182Q8N6D2 247 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 SPAG8Q99932 426 aaPredicted RBP6.24□□□□□ -1.41
CHD4-208ENST00000540960 GPR61Q9BZJ8 451 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 MS4A6AQ9H2W1 248 aa6.24□□□□□ -1.41
CHD4-208ENST00000540960 CCL24O00175 119 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 CA1P00915 261 aaPredicted RBP6.23□□□□□ -1.41
CHD4-208ENST00000540960 AMBPP02760 352 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 FRMD6-AS1P0C7T7 363 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 CAMPP49913 170 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 ZNF493Q6ZR52 646 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 APRG1Q8IVJ8 170 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 DCANP1Q8TF63 244 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 GTSF1Q8WW33 167 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 C8orf49Q96NF6 230 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 CNFNQ9BYD5 112 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 LAMTOR2Q9Y2Q5 125 aa6.23□□□□□ -1.41
CHD4-208ENST00000540960 SPINK4O60575 86 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 PPP1R17O96001 155 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 OR5AL1P0C617 328 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 ASIPP42127 132 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 CRIP1P50238 77 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 ERCC8Q13216 396 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 LINC00322Q6ZN03 302 aaPredicted RBP6.22□□□□□ -1.41
CHD4-208ENST00000540960 Q8TAT8 98 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 CHCHD1Q96BP2 118 aaKnown RBP6.22□□□□□ -1.41
CHD4-208ENST00000540960 CLUHP3Q96NS8 147 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 TM2D3Q9BRN9 247 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 SAMD10Q9BYL1 202 aa6.22□□□□□ -1.41
CHD4-208ENST00000540960 SORL1Q92673 2214 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 IGHV4-4A0A075B6R2 117 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 LOC102724200A0A096LPH7 203 aaPredicted RBP6.21□□□□□ -1.42
CHD4-208ENST00000540960 PRAC2D3DTV9 90 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 IGLC6P0CF74 106 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 S100A4P26447 101 aaKnown RBP6.21□□□□□ -1.42
CHD4-208ENST00000540960 HLA-DMBP28068 263 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 S100A12P80511 92 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 FHL3Q13643 280 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 TWIST1Q15672 202 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 PSMG4Q5JS54 123 aa6.21□□□□□ -1.42
CHD4-208ENST00000540960 IGFL4Q6B9Z1 124 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 584.2 ms