RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 FBLL1A6NHQ2 334 aaKnown RBP6.49□□□□□ -1.37
SNHG1-215ENST00000540904 GNRH2O43555 120 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 SPINK4O60575 86 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 GCGP01275 180 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 P0DMU3 169 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 FAM231AP0DMU4 169 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 FAM231CP0DMU5 169 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 RAB5CP51148 216 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 ZNF80P51504 273 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-215ENST00000540904 OR5I1Q13606 314 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 SMUG1Q53HV7 270 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 SAPCD1Q5SSQ6 148 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 SLC51BQ86UW2 128 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 C9orf62Q8N4C0 152 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 SDF2L1Q9HCN8 221 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 ARL2-SNX15V9GYD0 113 aa6.49□□□□□ -1.37
SNHG1-215ENST00000540904 NUDT3O95989 172 aa6.48□□□□□ -1.37
SNHG1-215ENST00000540904 PFN1P07737 140 aaKnown RBP6.48□□□□□ -1.37
SNHG1-215ENST00000540904 HOXA5P20719 270 aa6.48□□□□□ -1.37
SNHG1-215ENST00000540904 LGALS9BQ3B8N2 356 aa6.48□□□□□ -1.37
SNHG1-215ENST00000540904 TDRG1Q3Y452 100 aa6.48□□□□□ -1.37
SNHG1-215ENST00000540904 Q86TA4 180 aa6.48□□□□□ -1.37
SNHG1-215ENST00000540904 C15orf53Q8NAA6 179 aa6.48□□□□□ -1.37
SNHG1-215ENST00000540904 TCEAL7Q9BRU2 100 aa6.48□□□□□ -1.37
SNHG1-215ENST00000540904 GNG13Q9P2W3 67 aa6.48□□□□□ -1.37
SNHG1-215ENST00000540904 TRAV26-1A0A087WT03 109 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 IGHV3-16A0A0C4DH30 117 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 A0A0J9YY99 117 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 TEX46H3BTG2 121 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 IGHV3-53P01767 116 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 TYMSP04818 313 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 AKR1C3P42330 323 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 SULT1A2P50226 295 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 NKX2-5P52952 324 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-215ENST00000540904 UBE2G1P62253 170 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 CCL20P78556 96 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 UBE2DNLQ8IWF7 75 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 FMC1Q96HJ9 113 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 KCNS1Q96KK3 526 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 C11orf21Q9P2W6 132 aa6.47□□□□□ -1.37
SNHG1-215ENST00000540904 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
SNHG1-215ENST00000540904 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.38
SNHG1-215ENST00000540904 POM121L12Q8N7R1 296 aa6.46□□□□□ -1.38
SNHG1-215ENST00000540904 C18orf15Q96N68 181 aa6.46□□□□□ -1.38
SNHG1-215ENST00000540904 SPXQ9BT56 116 aa6.46□□□□□ -1.38
SNHG1-215ENST00000540904 ZFP30Q9Y2G7 519 aa6.46□□□□□ -1.38
SNHG1-215ENST00000540904 FABP5P3A8MUU1 101 aa6.45□□□□□ -1.38
SNHG1-215ENST00000540904 M0R2P5 195 aa6.45□□□□□ -1.38
SNHG1-215ENST00000540904 RASL10AQ92737 203 aa6.45□□□□□ -1.38
SNHG1-215ENST00000540904 ZC2HC1AQ96GY0 325 aa6.45□□□□□ -1.38
SNHG1-215ENST00000540904 MANBALQ9NQG1 85 aa6.45□□□□□ -1.38
SNHG1-215ENST00000540904 RYR3Q15413 4870 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 IGKV3D-20A0A0C4DH25 116 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 TRBV6-1A0A0K0K1D8 114 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 C9JCJ5 164 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 M0R036 132 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 SH2D1AO60880 128 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 LTAP01374 205 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 ORM1P02763 201 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 S100A9P06702 114 aaKnown RBP6.44□□□□□ -1.38
SNHG1-215ENST00000540904 SFTA3P0C7M3 94 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 CRIP1P50238 77 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 RNF212Q495C1 297 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 FAM162BQ5T6X4 162 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 ALKAL2Q6UX46 152 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 NHLRC2Q8NBF2 726 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 LYSTQ99698 3801 aa6.44□□□□□ -1.38
SNHG1-215ENST00000540904 IGLV2-18A0A075B6J9 118 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 TRGV4A0A0C4DH28 118 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 B4DEV8 164 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 H3BNG1 76 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 PAX4O43316 350 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 S100A4P26447 101 aaKnown RBP6.43□□□□□ -1.38
SNHG1-215ENST00000540904 CCL18P55774 89 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 ZNF876PQ49A33 203 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 COX8CQ7Z4L0 72 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 BAGE2Q86Y30 109 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 OR4C5Q8NGB2 326 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 VSIG2Q96IQ7 327 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 ZNF479Q96JC4 524 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 HHLA3Q9XRX5 114 aa6.43□□□□□ -1.38
SNHG1-215ENST00000540904 DYNC2H1Q8NCM8 4307 aaKnown RBP6.42□□□□□ -1.38
SNHG1-215ENST00000540904 TRAV4A0A0B4J268 109 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 M0R2N4 97 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 IFNA1P01562 189 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 RNASE3P12724 160 aaKnown RBP6.42□□□□□ -1.38
SNHG1-215ENST00000540904 ASIPP42127 132 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 RPL35P42766 123 aaKnown RBP6.42□□□□□ -1.38
SNHG1-215ENST00000540904 MEF2BQ02080 365 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-215ENST00000540904 SLAQ13239 276 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 FHL2Q14192 279 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 ZNF674Q2M3X9 581 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 C9orf85Q96MD7 179 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 DERL1Q9BUN8 251 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 PRO0255Q9UI72 69 aa6.42□□□□□ -1.38
SNHG1-215ENST00000540904 TMSB15BA0A087X1C1 80 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 A0A096LPF7 62 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 GRIFINA4D1Z8 144 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 PGPEP1LA6NFU8 196 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 KRBOX1C9JBD0 128 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms