RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 GEMIN2O14893 280 aaKnown RBP1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 CCL16O15467 120 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 APOC2P02655 101 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 UBE2G1P62253 170 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 PDE6HQ13956 83 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 Q56UQ5 140 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 NCMAPQ5T1S8 102 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 CSAG1Q6PB30 78 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 ATP11AUNQ6ZP68 121 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 CPAMD8Q8IZJ3 1885 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 VSTM2AQ8TAG5 236 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 DYNLRB2Q8TF09 96 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 LSM10Q969L4 123 aaKnown RBP1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 LINC00052Q96N35 136 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 MRPL57Q9BQC6 102 aaKnown RBP1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 SNRNP25Q9BV90 132 aaKnown RBP1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 NDUFA12Q9UI09 145 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 MYH7BA7E2Y1 1941 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 GRIN2AQ12879 1464 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 USP24Q9UPU5 2620 aa1.36□□□□□ -2.19
SRGAP1-203ENST00000537585 ADGRB3O60242 1522 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 TRGV2A0A075B6R0 118 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 TMEM30CPA0ZSE6 113 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 NDUFB6O95139 128 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 COX7CP15954 63 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 SPRNQ5BIV9 151 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 KIAA2026Q5HYC2 2103 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 C10orf55Q5SWW7 151 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 C8orf59Q8N0T1 100 aaPredicted RBP1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 Q8N2B8 174 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 C4orf3Q8WVX3 66 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 SERP1Q9Y6X1 66 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 EML6Q6ZMW3 1958 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 MBD5Q9P267 1494 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 SDK2Q58EX2 2172 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 UTRNP46939 3433 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 PIK3C2AO00443 1686 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 ANKRD31Q8N7Z5 1873 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 ARHGAP32A7KAX9 2087 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 MAST4O15021 2626 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 POLEQ07864 2286 aa1.35□□□□□ -2.19
SRGAP1-203ENST00000537585 KTN1Q86UP2 1357 aaKnown RBP1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 RP1L1Q8IWN7 2480 aaPredicted RBP1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 TMEM2Q9UHN6 1383 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 A0A087WSZ3 146 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 M0R143 59 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 S100A8P05109 93 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 SPINK8P0C7L1 97 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 SLC25A6P12236 298 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 IFITM1P13164 125 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 SNCAP37840 140 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 HSD52Q0P140 79 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 SPANXN1Q5VSR9 72 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 ZNF625Q96I27 306 aaPredicted RBP1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 TMEM14CQ9P0S9 112 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 CDK5RAP2Q96SN8 1893 aa1.34□□□□□ -2.19
SRGAP1-203ENST00000537585 KDM6AO15550 1401 aaPredicted RBP1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 TRBV6-4A0A1B0GX49 114 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 OOSP1A8MZH6 123 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 CCL25O15444 150 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 IL9P15248 144 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 NPC2P61916 151 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 INSL4Q14641 139 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 RHOHQ15669 191 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 LYPD5Q6UWN5 251 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 OR10AG1Q8NH19 301 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 DSCR8Q96T75 97 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 MRPL35Q9NZE8 188 aaKnown RBP1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 MRPL36Q9P0J6 103 aaKnown RBP1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 SNURFQ9Y675 71 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 SHROOM3Q8TF72 1996 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 DIDO1Q9BTC0 2240 aaKnown RBP1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 CCNB3Q8WWL7 1395 aa1.33□□□□□ -2.2
SRGAP1-203ENST00000537585 TNRC18O15417 2968 aaPredicted RBP1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 USP9XQ93008 2570 aaPredicted RBP1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 NISCHQ9Y2I1 1504 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 TRAV30A0A087WSZ9 112 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 FAM24AA6NFZ4 105 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 ASB16-AS1Q495Z4 193 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 PATE1Q8WXA2 126 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 TMEM141Q96I45 108 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 ATG5Q9H1Y0 275 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 Q9H521 79 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 RPRMQ9NS64 109 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 LRP5O75197 1615 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 ZFC3H1O60293 1989 aaKnown RBP1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 COL4A2P08572 1712 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 MYOM3Q5VTT5 1437 aa1.32□□□□□ -2.2
SRGAP1-203ENST00000537585 NCKAP5O14513 1909 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 ANAPC1Q9H1A4 1944 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 UBR4Q5T4S7 5183 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 PTPRBP23467 1997 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 SZT2Q5T011 3432 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 TRBV6-7A0A0A0MS04 114 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 JMJD7-PLA2G4BH0Y9G9 81 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 PKIAP61925 76 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 MPV17LQ2QL34 196 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 Q6AWC8 147 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 SLC48A1Q6P1K1 146 aa1.31□□□□□ -2.2
SRGAP1-203ENST00000537585 Q6ZRN7 208 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms