RNA–Protein interactions for RNA: ENST00000537323.5

PABPC1L-217, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 1 (best) BASIC

Gene PABPC1L, Length 1,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-217ENST00000537323 ZMAT4Q9H898 229 aa13.58□□□□□ -0.23
PABPC1L-217ENST00000537323 TMEM8BA6NDV4 472 aa13.58□□□□□ -0.24
PABPC1L-217ENST00000537323 MED14OSP0DP75 135 aa13.58□□□□□ -0.24
PABPC1L-217ENST00000537323 LAGE3Q14657 143 aa13.58□□□□□ -0.24
PABPC1L-217ENST00000537323 ODF1Q14990 250 aa13.58□□□□□ -0.24
PABPC1L-217ENST00000537323 VAMP3Q15836 100 aa13.58□□□□□ -0.24
PABPC1L-217ENST00000537323 FAM19A4Q96LR4 140 aa13.58□□□□□ -0.24
PABPC1L-217ENST00000537323 RHPN1-AS1Q9BWJ2 59 aa13.58□□□□□ -0.24
PABPC1L-217ENST00000537323 SMPXQ9UHP9 88 aa13.58□□□□□ -0.24
PABPC1L-217ENST00000537323 PRSS1P07477 247 aa13.57□□□□□ -0.24
PABPC1L-217ENST00000537323 RPL11P62913 178 aaKnown RBP13.57□□□□□ -0.24
PABPC1L-217ENST00000537323 CFHR3Q02985 330 aa13.57□□□□□ -0.24
PABPC1L-217ENST00000537323 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
PABPC1L-217ENST00000537323 A1L4Q6 167 aa13.56□□□□□ -0.24
PABPC1L-217ENST00000537323 ASIPP42127 132 aa13.56□□□□□ -0.24
PABPC1L-217ENST00000537323 Q6ZS46 218 aa13.56□□□□□ -0.24
PABPC1L-217ENST00000537323 DAZ1Q9NQZ3 744 aaKnown RBP13.56□□□□□ -0.24
PABPC1L-217ENST00000537323 K7EMT4 169 aa13.56□□□□□ -0.24
PABPC1L-217ENST00000537323 TRAV26-2A0A0B4J265 109 aa13.55□□□□□ -0.24
PABPC1L-217ENST00000537323 J3KRW8 73 aa13.55□□□□□ -0.24
PABPC1L-217ENST00000537323 SMIM17P0DL12 118 aa13.55□□□□□ -0.24
PABPC1L-217ENST00000537323 S100A4P26447 101 aaKnown RBP13.55□□□□□ -0.24
PABPC1L-217ENST00000537323 HSD52Q0P140 79 aa13.55□□□□□ -0.24
PABPC1L-217ENST00000537323 TM4SF20Q53R12 229 aa13.55□□□□□ -0.24
PABPC1L-217ENST00000537323 SAMD13Q5VXD3 122 aa13.55□□□□□ -0.24
PABPC1L-217ENST00000537323 SRSF1Q07955 248 aaKnown RBP eCLIP13.54□□□□□ -0.241e-7■■■■□ 19.5
PABPC1L-217ENST00000537323 MYOZ3Q8TDC0 251 aa13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 FOXC2Q99958 501 aa13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 PEF1Q9UBV8 284 aaKnown RBP13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 CBY3A6NI87 242 aa13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 AVPP01185 164 aa13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 IGKCP01834 107 aa13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 NMUP48645 174 aa13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 LCNL1Q6ZST4 164 aa13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 DPH3P1Q9H4G8 78 aa13.54□□□□□ -0.24
PABPC1L-217ENST00000537323 DPM2O94777 84 aa13.53□□□□□ -0.24
PABPC1L-217ENST00000537323 SLC25A16P16260 332 aa13.53□□□□□ -0.24
PABPC1L-217ENST00000537323 RNASE4P34096 147 aaKnown RBP13.53□□□□□ -0.24
PABPC1L-217ENST00000537323 ANXA2RQ3ZCQ2 193 aa13.53□□□□□ -0.24
PABPC1L-217ENST00000537323 SMIM2Q9BVW6 85 aa13.53□□□□□ -0.24
PABPC1L-217ENST00000537323 PHLDA3Q9Y5J5 127 aa13.53□□□□□ -0.24
PABPC1L-217ENST00000537323 SPTAN1Q13813 2472 aaKnown RBP13.53□□□□□ -0.24
PABPC1L-217ENST00000537323 ID1P41134 155 aa13.52□□□□□ -0.24
PABPC1L-217ENST00000537323 KIR3DS1Q14943 382 aa13.52□□□□□ -0.24
PABPC1L-217ENST00000537323 OR4C5Q8NGB2 326 aa13.52□□□□□ -0.24
PABPC1L-217ENST00000537323 PKD1L2Q7Z442 2459 aa13.52□□□□□ -0.24
PABPC1L-217ENST00000537323 A6NDN8 102 aa13.52□□□□□ -0.25
PABPC1L-217ENST00000537323 M0R381 172 aa13.52□□□□□ -0.25
PABPC1L-217ENST00000537323 DEFB1P60022 68 aa13.52□□□□□ -0.25
PABPC1L-217ENST00000537323 HHLA3Q9XRX5 114 aa13.52□□□□□ -0.25
PABPC1L-217ENST00000537323 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
PABPC1L-217ENST00000537323 F6UB75 175 aa13.51□□□□□ -0.25
PABPC1L-217ENST00000537323 TCTAP57738 103 aa13.51□□□□□ -0.25
PABPC1L-217ENST00000537323 PCP2Q8IVA1 136 aa13.51□□□□□ -0.25
PABPC1L-217ENST00000537323 C20orf78Q9BR46 151 aa13.51□□□□□ -0.25
PABPC1L-217ENST00000537323 IGKV3-7A0A075B6H7 116 aa13.51□□□□□ -0.25
PABPC1L-217ENST00000537323 ADAMTSL5Q6ZMM2 481 aa13.51□□□□□ -0.25
PABPC1L-217ENST00000537323 LINC01356Q8N9X3 169 aa13.51□□□□□ -0.25
PABPC1L-217ENST00000537323 C7orf71A4D174 169 aa13.5□□□□□ -0.25
PABPC1L-217ENST00000537323 K7EMI3 77 aa13.5□□□□□ -0.25
PABPC1L-217ENST00000537323 PSMB8P28062 276 aa13.5□□□□□ -0.25
PABPC1L-217ENST00000537323 ORMDL2Q53FV1 153 aa13.5□□□□□ -0.25
PABPC1L-217ENST00000537323 CSTL1Q9H114 145 aa13.5□□□□□ -0.25
PABPC1L-217ENST00000537323 HLA-DRB4P13762 266 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 ERASQ7Z444 233 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 HLA-DRB4X5D2U9 266 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 TMEM238C9JI98 176 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 H3BRM9 83 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 J3QLI3 93 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 PPP1R17O96001 155 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 SUMO2P61956 95 aaKnown RBP13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 DEFB112Q30KQ8 113 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 RASL10AQ92737 203 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 AP1S3Q96PC3 154 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 HIGD1BQ9P298 99 aa13.49□□□□□ -0.25
PABPC1L-217ENST00000537323 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.48□□□□□ -0.258e-7■■■□□ 15
PABPC1L-217ENST00000537323 A0A087WX48 190 aa13.48□□□□□ -0.25
PABPC1L-217ENST00000537323 KLLNB2CW77 178 aa13.48□□□□□ -0.25
PABPC1L-217ENST00000537323 AMMECR1LQ6DCA0 310 aa13.48□□□□□ -0.25
PABPC1L-217ENST00000537323 C14orf178Q8N769 122 aaPredicted RBP13.48□□□□□ -0.25
PABPC1L-217ENST00000537323 GNRH2O43555 120 aa13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 NXPH4O95158 308 aa13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 IGHV4-59P01825 116 aa13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 RNASE3P12724 160 aaKnown RBP13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 TMEM95Q3KNT9 176 aa13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 DCANP1Q8TF63 244 aa13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 TRAV12-1A0A0B4J245 112 aa13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 MRPL35Q9NZE8 188 aaKnown RBP13.47□□□□□ -0.25
PABPC1L-217ENST00000537323 DOPEY1Q5JWR5 2465 aa13.46□□□□□ -0.25
PABPC1L-217ENST00000537323 IGKV2D-26A0A0A0MRZ7 120 aa13.46□□□□□ -0.25
PABPC1L-217ENST00000537323 MGPP08493 103 aa13.46□□□□□ -0.25
PABPC1L-217ENST00000537323 SRD5A1P18405 259 aa13.46□□□□□ -0.25
PABPC1L-217ENST00000537323 ZC2HC1BQ5TFG8 222 aa13.46□□□□□ -0.25
PABPC1L-217ENST00000537323 POM121L12Q8N7R1 296 aa13.46□□□□□ -0.25
PABPC1L-217ENST00000537323 TMEM160Q9NX00 188 aa13.46□□□□□ -0.25
PABPC1L-217ENST00000537323 TRAV8-6A0A0B4J262 113 aa13.45□□□□□ -0.26
PABPC1L-217ENST00000537323 SPRY2O43597 315 aa13.45□□□□□ -0.26
PABPC1L-217ENST00000537323 PLNP26678 52 aa13.45□□□□□ -0.26
PABPC1L-217ENST00000537323 GTSCR1Q86UQ5 136 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms