RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 SEC11CQ9BY50 192 aa17.51■□□□□ 0.39
HMGA2-207ENST00000537275 IGKV3D-20A0A0C4DH25 116 aa17.5■□□□□ 0.39
HMGA2-207ENST00000537275 AZU1P20160 251 aa17.49■□□□□ 0.39
HMGA2-207ENST00000537275 RRN3P1Q2M238 152 aa17.49■□□□□ 0.39
HMGA2-207ENST00000537275 DAZAP1Q96EP5 407 aaKnown RBP17.49■□□□□ 0.39
HMGA2-207ENST00000537275 KCNS1Q96KK3 526 aa17.49■□□□□ 0.39
HMGA2-207ENST00000537275 TP53TG3Q9ULZ0 132 aa17.49■□□□□ 0.39
HMGA2-207ENST00000537275 ORM1P02763 201 aa17.48■□□□□ 0.39
HMGA2-207ENST00000537275 MIFP14174 115 aa17.48■□□□□ 0.39
HMGA2-207ENST00000537275 ADIRFQ15847 76 aa17.48■□□□□ 0.39
HMGA2-207ENST00000537275 LINC01559Q495D7 138 aa17.48■□□□□ 0.39
HMGA2-207ENST00000537275 CBY3A6NI87 242 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 C10orf91Q5T1B1 145 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 NUDT10Q8NFP7 164 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 ISOC2Q96AB3 205 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 NUDT11Q96G61 164 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 RNASE7Q9H1E1 156 aaKnown RBP17.47■□□□□ 0.39
HMGA2-207ENST00000537275 COL7A1Q02388 2944 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 KRBOX1C9JBD0 128 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 M0R036 132 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 FAM231DQ6ZW35 169 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 ZNF575Q86XF7 245 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 Q8NAQ8 132 aa17.47■□□□□ 0.39
HMGA2-207ENST00000537275 RNASE8Q8TDE3 154 aaKnown RBP17.47■□□□□ 0.39
HMGA2-207ENST00000537275 B4DEV8 164 aa17.46■□□□□ 0.39
HMGA2-207ENST00000537275 GNRH2O43555 120 aa17.46■□□□□ 0.39
HMGA2-207ENST00000537275 P01737 135 aa17.46■□□□□ 0.39
HMGA2-207ENST00000537275 TYMSP04818 313 aa17.46■□□□□ 0.39
HMGA2-207ENST00000537275 PNRC1Q12796 327 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-207ENST00000537275 IBA57Q5T440 356 aaKnown RBP17.46■□□□□ 0.39
HMGA2-207ENST00000537275 TMEM263Q8WUH6 116 aaKnown RBP17.46■□□□□ 0.39
HMGA2-207ENST00000537275 RPL19P84098 196 aaKnown RBP17.45■□□□□ 0.38
HMGA2-207ENST00000537275 ZNF493Q6ZR52 646 aa17.45■□□□□ 0.38
HMGA2-207ENST00000537275 IGHV4-28A0A0C4DH34 117 aa17.44■□□□□ 0.38
HMGA2-207ENST00000537275 ERVFC1-1P60608 527 aa17.44■□□□□ 0.38
HMGA2-207ENST00000537275 C16orf74Q96GX8 76 aa17.44■□□□□ 0.38
HMGA2-207ENST00000537275 CARHSP1Q9Y2V2 147 aaKnown RBP17.44■□□□□ 0.38
HMGA2-207ENST00000537275 TRGV11A0A075B6L2 103 aa17.43■□□□□ 0.38
HMGA2-207ENST00000537275 TMEM189A5PLL7 270 aa17.43■□□□□ 0.38
HMGA2-207ENST00000537275 DEFB4AO15263 64 aa17.43■□□□□ 0.38
HMGA2-207ENST00000537275 OSTCQ9NRP0 149 aa17.43■□□□□ 0.38
HMGA2-207ENST00000537275 TENM3Q9P273 2699 aa17.43■□□□□ 0.38
HMGA2-207ENST00000537275 TMSB15BA0A087X1C1 80 aa17.42■□□□□ 0.38
HMGA2-207ENST00000537275 PLAC8L1A1L4L8 177 aa17.42■□□□□ 0.38
HMGA2-207ENST00000537275 EMP1P54849 157 aa17.42■□□□□ 0.38
HMGA2-207ENST00000537275 C11orf72Q8NBR9 251 aa17.42■□□□□ 0.38
HMGA2-207ENST00000537275 OR2D3Q8NGH3 330 aa17.42■□□□□ 0.38
HMGA2-207ENST00000537275 SFRP2Q96HF1 295 aa17.42■□□□□ 0.38
HMGA2-207ENST00000537275 MDFICQ9P1T7 246 aa17.42■□□□□ 0.38
HMGA2-207ENST00000537275 IGHV3-16A0A0C4DH30 117 aa17.42■□□□□ 0.38
HMGA2-207ENST00000537275 DNLZQ5SXM8 178 aa17.41■□□□□ 0.38
HMGA2-207ENST00000537275 RPP21Q9H633 154 aaKnown RBP17.41■□□□□ 0.38
HMGA2-207ENST00000537275 U3KQK5 164 aa17.41■□□□□ 0.38
HMGA2-207ENST00000537275 GRIFINA4D1Z8 144 aa17.4■□□□□ 0.38
HMGA2-207ENST00000537275 GATCO43716 136 aaKnown RBP17.4■□□□□ 0.38
HMGA2-207ENST00000537275 CXCL1P09341 107 aa17.4■□□□□ 0.38
HMGA2-207ENST00000537275 GSN-AS1Q9NRJ2 163 aa17.4■□□□□ 0.38
HMGA2-207ENST00000537275 ZNF415Q09FC8 603 aa17.39■□□□□ 0.37
HMGA2-207ENST00000537275 C15orf54Q8N8G6 183 aa17.39■□□□□ 0.37
HMGA2-207ENST00000537275 C11orf68Q9H3H3 251 aaKnown RBP17.39■□□□□ 0.37
HMGA2-207ENST00000537275 RNASE3P12724 160 aaKnown RBP17.38■□□□□ 0.37
HMGA2-207ENST00000537275 ASIPP42127 132 aa17.38■□□□□ 0.37
HMGA2-207ENST00000537275 TCL1AP56279 114 aa17.38■□□□□ 0.37
HMGA2-207ENST00000537275 RPS20P60866 119 aaKnown RBP17.38■□□□□ 0.37
HMGA2-207ENST00000537275 OR10G8Q8NGN5 311 aa17.38■□□□□ 0.37
HMGA2-207ENST00000537275 IL17DQ8TAD2 202 aa17.38■□□□□ 0.37
HMGA2-207ENST00000537275 A0A0J9YWU9 116 aa17.37■□□□□ 0.37
HMGA2-207ENST00000537275 V9GYV3 84 aa17.37■□□□□ 0.37
HMGA2-207ENST00000537275 XKRY2A2RUG3 117 aa17.37■□□□□ 0.37
HMGA2-207ENST00000537275 SNURFLB1AK76 121 aa17.37■□□□□ 0.37
HMGA2-207ENST00000537275 S100A4P26447 101 aaKnown RBP17.37■□□□□ 0.37
HMGA2-207ENST00000537275 CT83Q5H943 113 aa17.37■□□□□ 0.37
HMGA2-207ENST00000537275 IL36BQ9NZH7 164 aa17.37■□□□□ 0.37
HMGA2-207ENST00000537275 TIMM8BQ9Y5J9 83 aaPredicted RBP17.37■□□□□ 0.37
HMGA2-207ENST00000537275 GZMBP10144 247 aa17.36■□□□□ 0.37
HMGA2-207ENST00000537275 DAZ2Q13117 558 aaKnown RBP17.36■□□□□ 0.37
HMGA2-207ENST00000537275 C9orf85Q96MD7 179 aa17.36■□□□□ 0.37
HMGA2-207ENST00000537275 ARMS2P0C7Q2 107 aa17.35■□□□□ 0.37
HMGA2-207ENST00000537275 NOP10Q9NPE3 64 aaKnown RBP17.35■□□□□ 0.37
HMGA2-207ENST00000537275 A8MWL6 223 aa17.34■□□□□ 0.37
HMGA2-207ENST00000537275 APOC3P02656 99 aa17.34■□□□□ 0.37
HMGA2-207ENST00000537275 RNF212Q495C1 297 aa17.34■□□□□ 0.37
HMGA2-207ENST00000537275 SPXQ9BT56 116 aa17.34■□□□□ 0.37
HMGA2-207ENST00000537275 H3BVH4 76 aa17.33■□□□□ 0.37
HMGA2-207ENST00000537275 IGLC6P0CF74 106 aa17.33■□□□□ 0.37
HMGA2-207ENST00000537275 MED14OSP0DP75 135 aa17.33■□□□□ 0.37
HMGA2-207ENST00000537275 SSBP4Q9BWG4 385 aaPredicted RBP17.33■□□□□ 0.37
HMGA2-207ENST00000537275 SCRT2Q9NQ03 307 aa17.33■□□□□ 0.37
HMGA2-207ENST00000537275 DKK2Q9UBU2 259 aa17.33■□□□□ 0.37
HMGA2-207ENST00000537275 PPP1R2P9O14990 202 aa17.32■□□□□ 0.36
HMGA2-207ENST00000537275 MT-ND4LP03901 98 aa17.32■□□□□ 0.36
HMGA2-207ENST00000537275 FAM222AQ5U5X8 452 aa17.31■□□□□ 0.36
HMGA2-207ENST00000537275 CLRN3Q8NCR9 226 aa17.31■□□□□ 0.36
HMGA2-207ENST00000537275 TSKUQ8WUA8 353 aa17.31■□□□□ 0.36
HMGA2-207ENST00000537275 GTSF1Q8WW33 167 aa17.31■□□□□ 0.36
HMGA2-207ENST00000537275 ANAPC16Q96DE5 110 aa17.31■□□□□ 0.36
HMGA2-207ENST00000537275 LYRM9A8MSI8 78 aa17.31■□□□□ 0.36
HMGA2-207ENST00000537275 SNAI2O43623 268 aa17.31■□□□□ 0.36
HMGA2-207ENST00000537275 SPINK4O60575 86 aa17.31■□□□□ 0.36
HMGA2-207ENST00000537275 OR5AL1P0C617 328 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms