RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 A0A087WSZ3 146 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 hDV103S1A0JD37 113 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 PSG9Q00887 426 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 TMEM14EPQ6UXP3 125 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 ARPINQ7Z6K5 226 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 OR5AS1Q8N127 324 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 FAM216BQ8N7L0 139 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 CARD19Q96LW7 228 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 OTORQ9NRC9 128 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 ATPIF1Q9UII2 106 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 NUBP2Q9Y5Y2 271 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 EYSQ5T1H1 3165 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 LAMA2P24043 3122 aaKnown RBP1.5□□□□□ -2.17
PRKDC-208ENST00000536710 POLEQ07864 2286 aa1.5□□□□□ -2.17
PRKDC-208ENST00000536710 IBTKQ9P2D0 1353 aaPredicted RBP1.49□□□□□ -2.17
PRKDC-208ENST00000536710 SZT2Q5T011 3432 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 AKAP11Q9UKA4 1901 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 COX7CP15954 63 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 CIRBPQ14011 172 aaKnown RBP1.49□□□□□ -2.17
PRKDC-208ENST00000536710 PHF5AQ7RTV0 110 aaKnown RBP1.49□□□□□ -2.17
PRKDC-208ENST00000536710 ISOC1Q96CN7 298 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 CCDC32Q9BV29 185 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 NAT8BQ9UHF3 227 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 TNFSF18Q9UNG2 199 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 COL6A3P12111 3177 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 DNAH12Q6ZR08 3092 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 PRUNE2Q8WUY3 3088 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 TNRC6BQ9UPQ9 1833 aaKnown RBP1.49□□□□□ -2.17
PRKDC-208ENST00000536710 ZNF609O15014 1411 aa1.49□□□□□ -2.17
PRKDC-208ENST00000536710 MYH7BA7E2Y1 1941 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 RANBP2P49792 3224 aaKnown RBP1.48□□□□□ -2.17
PRKDC-208ENST00000536710 A0A1B0GV72 72 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 NCR3O14931 201 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 FABP2P12104 132 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 ANGPTL5Q86XS5 388 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 ZC2HC1AQ96GY0 325 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 AMELYQ99218 206 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 EML6Q6ZMW3 1958 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 CASP8AP2Q9UKL3 1982 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 TECTAO75443 2155 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 MYH13Q9UKX3 1938 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 REV3LO60673 3130 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 LAMA3Q16787 3333 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 FLG2Q5D862 2391 aaPredicted RBP1.48□□□□□ -2.17
PRKDC-208ENST00000536710 UNC80Q8N2C7 3258 aa1.48□□□□□ -2.17
PRKDC-208ENST00000536710 EXPH5Q8NEV8 1989 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 PTPRFP10586 1907 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 CEP192Q8TEP8 1941 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 C5orf67F2Z3F1 127 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 KPNA4O00629 521 aaPredicted RBP1.47□□□□□ -2.17
PRKDC-208ENST00000536710 TMEM78Q5T7P6 136 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 HAGHLQ6PII5 290 aaPredicted RBP1.47□□□□□ -2.17
PRKDC-208ENST00000536710 PRR15Q8IV56 129 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 MGAMO43451 1857 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 CDK5RAP2Q96SN8 1893 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 MUC3AQ02505 3323 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 FOCADQ5VW36 1801 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 PHIPQ8WWQ0 1821 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 SSC5DA1L4H1 1573 aa1.47□□□□□ -2.17
PRKDC-208ENST00000536710 ALPK3Q96L96 1907 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 COL6A6A6NMZ7 2263 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 SPTBN5Q9NRC6 3674 aaKnown RBP1.46□□□□□ -2.18
PRKDC-208ENST00000536710 IGLV3-32A0A0A0MS00 114 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 TRDV1A0A1B0GX56 115 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 C9orf170A2RU37 121 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 PGRMC1O00264 195 aaKnown RBP1.46□□□□□ -2.18
PRKDC-208ENST00000536710 KRTAP26-1Q6PEX3 210 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 PLPP5Q8NEB5 264 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 CENPHQ9H3R5 247 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 LAMTOR2Q9Y2Q5 125 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 DOCK4Q8N1I0 1966 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 CDH23Q9H251 3354 aa1.46□□□□□ -2.18
PRKDC-208ENST00000536710 VCANP13611 3396 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 A0A096LPI6 279 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 A0A1W2PRE2 83 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 E7EQ34 232 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 GABARAPH6UMI1 98 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 IFNA21P01568 189 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 VMA21Q3ZAQ7 101 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 OR10AG1Q8NH19 301 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 GRPEL2Q8TAA5 225 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 TCEAL2Q9H3H9 227 aaPredicted RBP1.45□□□□□ -2.18
PRKDC-208ENST00000536710 MYO5AQ9Y4I1 1855 aaKnown RBP1.45□□□□□ -2.18
PRKDC-208ENST00000536710 A0A0C4DFX4 3053 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 RTL9Q8NET4 1388 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 PLXNB2O15031 1838 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 PARP14Q460N5 1801 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 DOCK2Q92608 1830 aa1.45□□□□□ -2.18
PRKDC-208ENST00000536710 LOC285556D6RIA3 1793 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 XIRP2A4UGR9 3374 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 DOCK1Q14185 1865 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 DDX60LQ5H9U9 1706 aaKnown RBP1.44□□□□□ -2.18
PRKDC-208ENST00000536710 KMT2BQ9UMN6 2715 aaPredicted RBP1.44□□□□□ -2.18
PRKDC-208ENST00000536710 BCL2P10415 239 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 S100A11P31949 105 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 WFDC10AQ9H1F0 79 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 LRTM1Q9HBL6 345 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 TPRKBQ9Y3C4 175 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 MYH2Q9UKX2 1941 aa1.44□□□□□ -2.18
PRKDC-208ENST00000536710 COL1A1P02452 1464 aaPredicted RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms