RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PRR30Q53SZ7 412 aaPredicted RBP2.88□□□□□ -1.95
MCF2-210ENST00000536274 Q86TA4 180 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 C3orf22Q8N5N4 141 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 WFDC11Q8NEX6 87 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 OR13C6PQ8NH95 151 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 SMCR5Q8TEV8 140 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 RITA1Q96K30 269 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 MRPL32Q9BYC8 188 aaKnown RBP2.88□□□□□ -1.95
MCF2-210ENST00000536274 X6R8D5 127 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 ARHGAP32A7KAX9 2087 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A23PA8MXZ1 464 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 ATP5LO75964 103 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FSTL3O95633 263 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 IGLV2-11P01706 119 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A15PP0C7V4 464 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A13PP0C7W8 464 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A14PP0C7W9 464 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 LIFP15018 202 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 SEC61GP60059 68 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 RPL11P62913 178 aaKnown RBP2.88□□□□□ -1.95
MCF2-210ENST00000536274 PCOLCEQ15113 449 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 GAGE2AQ6NT46 116 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 AAED1Q7RTV5 226 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 NXT2Q9NPJ8 142 aaKnown RBP2.88□□□□□ -1.95
MCF2-210ENST00000536274 PRNDQ9UKY0 176 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 IGF2RP11717 2491 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 IGHV1OR21-1A0A087WYE8 117 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 IGHV5-10-1A0A0J9YXX1 117 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A7PA6NKC0 464 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 C15orf61A6NNL5 157 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A22PA8MWA6 464 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A12PA8MX19 464 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 UBE2D1P51668 147 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 LY6DQ14210 128 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 Q1RN00 199 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 HCP5Q6MZN7 132 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A1Q86YD7 464 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 POM121L12Q8N7R1 296 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 IL17DQ8TAD2 202 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 Q8TAT8 98 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 PIFOQ8TCI5 191 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 CLEC2BQ92478 149 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 S1PR3Q99500 378 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 OCIAD1Q9NX40 245 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 DNAJC13O75165 2243 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 IGHV3OR15-7A0A075B7D8 119 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 TRBV6-6A0A0A6YYG2 114 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 FAM236DA0A1B0GTK5 79 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 TINCRA0A1B0GVN0 87 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 CYSRT1A8MQ03 144 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 FAM236CP0DP71 79 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 CCL3P10147 92 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 KHDC1LQ5JSQ8 128 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 SLC25A48Q6ZT89 311 aaKnown RBP2.87□□□□□ -1.95
MCF2-210ENST00000536274 SBSPONQ8IVN8 264 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 IGFBPL1Q8WX77 278 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 DPH3Q96FX2 82 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 S4R3C0 116 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 CEP295Q9C0D2 2601 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 ANKRD11Q6UB99 2663 aaPredicted RBP2.87□□□□□ -1.95
MCF2-210ENST00000536274 IGKV1D-37A0A075B6S9 117 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 TRAV13-1A0A0B4J241 112 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 TRGV3P03979 118 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 PRB3Q04118 309 aaPredicted RBP2.87□□□□□ -1.95
MCF2-210ENST00000536274 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 LRRC75A-AS1Q8N1F1 130 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 JPT2Q9H910 190 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 AKAP13Q12802 2813 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 CNOT1A5YKK6 2376 aaKnown RBP2.87□□□□□ -1.95
MCF2-210ENST00000536274 COL12A1Q99715 3063 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 TRAV12-3A0A0B4J271 114 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 H3BMM0 161 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 M0R2P5 195 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 LGALS9O00182 355 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 OVOL1O14753 267 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 DNPH1O43598 174 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 SH2D1AO60880 128 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 RNASE2P10153 161 aaKnown RBP2.87□□□□□ -1.95
MCF2-210ENST00000536274 MALP21145 153 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 TSPEAR-AS2P59090 65 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 DEFB133Q30KQ1 61 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 C2orf83Q53S99 150 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 FAM201AQ5SY85 155 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 TMEM170BQ5T4T1 132 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 Q6Q795 121 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 UBE2WQ96B02 151 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 CXXC4Q9H2H0 198 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 PYGO1Q9Y3Y4 419 aa2.87□□□□□ -1.95
MCF2-210ENST00000536274 TMEM30CPA0ZSE6 113 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 PRDX2P32119 198 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 ZNF80P51504 273 aaPredicted RBP2.86□□□□□ -1.95
MCF2-210ENST00000536274 CD69Q07108 199 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 LINC01620Q4KN68 170 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 C2orf82Q6UX34 121 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 NRACQ8N912 160 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 MBD3L2Q8NHZ7 208 aaPredicted RBP2.86□□□□□ -1.95
MCF2-210ENST00000536274 RNF185Q96GF1 192 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 GFRA4Q9GZZ7 299 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 ZNF256Q9Y2P7 627 aaPredicted RBP2.86□□□□□ -1.95
MCF2-210ENST00000536274 CHCHD2Q9Y6H1 151 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms