RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 GOLT1AQ6ZVE7 132 aa9.07□□□□□ -0.96
CLSTN3-205ENST00000535452 ASB13Q8WXK3 278 aa9.07□□□□□ -0.96
CLSTN3-205ENST00000535452 FBLL1A6NHQ2 334 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-205ENST00000535452 MBP02144 154 aa9.06□□□□□ -0.96
CLSTN3-205ENST00000535452 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
CLSTN3-205ENST00000535452 OR10J3Q5JRS4 329 aa9.06□□□□□ -0.96
CLSTN3-205ENST00000535452 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
CLSTN3-205ENST00000535452 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
CLSTN3-205ENST00000535452 ZNF479Q96JC4 524 aa9.06□□□□□ -0.96
CLSTN3-205ENST00000535452 DYNC1H1Q14204 4646 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-205ENST00000535452 H0YIZ8 118 aa9.05□□□□□ -0.96
CLSTN3-205ENST00000535452 TAAR5O14804 337 aa9.05□□□□□ -0.96
CLSTN3-205ENST00000535452 TDRG1Q3Y452 100 aa9.05□□□□□ -0.96
CLSTN3-205ENST00000535452 IGHV3-38A0A0C4DH36 116 aa9.04□□□□□ -0.96
CLSTN3-205ENST00000535452 F6UZH7 168 aa9.04□□□□□ -0.96
CLSTN3-205ENST00000535452 CDC34P49427 236 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-205ENST00000535452 H2BFSP57053 126 aa9.04□□□□□ -0.96
CLSTN3-205ENST00000535452 RHOHQ15669 191 aa9.04□□□□□ -0.96
CLSTN3-205ENST00000535452 ZNF876PQ49A33 203 aa9.04□□□□□ -0.96
CLSTN3-205ENST00000535452 MARVELD1Q9BSK0 173 aa9.04□□□□□ -0.96
CLSTN3-205ENST00000535452 A0A087WTM6 91 aa9.03□□□□□ -0.96
CLSTN3-205ENST00000535452 DNAH10OSP0CZ25 163 aa9.03□□□□□ -0.96
CLSTN3-205ENST00000535452 S100A4P26447 101 aaKnown RBP9.03□□□□□ -0.96
CLSTN3-205ENST00000535452 WFDC10BQ8IUB3 73 aa9.03□□□□□ -0.96
CLSTN3-205ENST00000535452 C5orf17Q8NAS9 161 aa9.03□□□□□ -0.96
CLSTN3-205ENST00000535452 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
CLSTN3-205ENST00000535452 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 IGHV3-16A0A0C4DH30 117 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 GNRH2O43555 120 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 TYMSP04818 313 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 GCSHP23434 173 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 SMUG1Q53HV7 270 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 SAPCD1Q5SSQ6 148 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 Q6ZQT7 251 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 TM2D2Q9BX73 214 aa9.02□□□□□ -0.97
CLSTN3-205ENST00000535452 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 HMGB3O15347 200 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 CXorf1O96002 111 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 ARL14EPLP0DKL9 152 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 MGST1P10620 155 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 TIRAPP58753 221 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 RAB2AP61019 212 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 TOR2AQ5JU69 321 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 KCNIP4Q6PIL6 250 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 Q6ZRN7 208 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 HSD17B11Q8NBQ5 300 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 INO80EQ8NBZ0 244 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 NTN5Q8WTR8 489 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 ACTR3CQ9C0K3 210 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-205ENST00000535452 TRBV6-4A0A1B0GX49 114 aa9□□□□□ -0.97
CLSTN3-205ENST00000535452 GCGP01275 180 aa9□□□□□ -0.97
CLSTN3-205ENST00000535452 SEC11BP0C7V7 166 aa9□□□□□ -0.97
CLSTN3-205ENST00000535452 GNG5P63218 68 aa9□□□□□ -0.97
CLSTN3-205ENST00000535452 SERF2P84101 59 aa9□□□□□ -0.97
CLSTN3-205ENST00000535452 PSMG3Q9BT73 122 aaPredicted RBP9□□□□□ -0.97
CLSTN3-205ENST00000535452 URGCP-MRPS24S4R325 110 aa9□□□□□ -0.97
CLSTN3-205ENST00000535452 TRAV8-1A0A0A6YYK1 113 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 BORCS7-ASMTA0A0B4J1R7 106 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 IFNA7P01567 189 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 TCRAP04437 139 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 INAFM2P0DMQ5 153 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 GATA1P15976 413 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 FLI1Q01543 452 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 PRNTQ86SH4 94 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 CYB561D1Q8N8Q1 229 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 MED28Q9H204 178 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 Q9HAA7 133 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 PSG8Q9UQ74 426 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 TNFRSF18Q9Y5U5 241 aa8.99□□□□□ -0.97
CLSTN3-205ENST00000535452 A8MWV9 139 aa8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 EIF3GO75821 320 aaKnown RBP eCLIP8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 STAG3L2P0CL84 134 aa8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 STAG3L3P0CL85 134 aa8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 SUMO1P63165 101 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 LGALSLQ3ZCW2 172 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 LINC01556Q5JQF7 62 aa8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 SYT8Q8NBV8 401 aa8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 ATP6V0E2Q8NHE4 81 aa8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 RAB24Q969Q5 203 aa8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 SGK494Q96LW2 274 aa8.98□□□□□ -0.97
CLSTN3-205ENST00000535452 IGHV3-73A0A0B4J1V6 119 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 GCHFRP30047 84 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 ASIPP42127 132 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 FGF8P55075 233 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 LELP1Q5T871 98 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 SLC25A29Q8N8R3 303 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 TMEM75Q8N9X5 138 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 OR2G3Q8NGZ4 309 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 RMI2Q96E14 147 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 NKX6-2Q9C056 277 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 GTSF1LQ9H1H1 148 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 COX11Q9Y6N1 276 aa8.97□□□□□ -0.97
CLSTN3-205ENST00000535452 A0A087WWC5 75 aa8.96□□□□□ -0.98
CLSTN3-205ENST00000535452 TRAV8-3A0A0A6YYJ7 113 aa8.96□□□□□ -0.98
CLSTN3-205ENST00000535452 IBA57-AS1B1ANH7 110 aa8.96□□□□□ -0.98
CLSTN3-205ENST00000535452 RS1O15537 224 aa8.96□□□□□ -0.98
CLSTN3-205ENST00000535452 IGHV3-30P01768 117 aa8.96□□□□□ -0.98
CLSTN3-205ENST00000535452 IGHV3-33P01772 117 aa8.96□□□□□ -0.98
CLSTN3-205ENST00000535452 IGHV3-30-3P0DP02 117 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms