RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 LINC00694P0DN24 101 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 HIST1H1EP10412 219 aaKnown RBP5.17□□□□□ -1.58
CLIP1-206ENST00000535290 SLC25A6P12236 298 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 ZNF138P52744 262 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 SRPXP78539 464 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 GAGE1Q13065 139 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 GAGE4Q13068 117 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 GAGE5Q13069 117 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 ZNF266Q14584 549 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 FAM159AQ6UWV7 190 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 C7orf33Q8WU49 177 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 SOSTQ9BQB4 213 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 CCDC59Q9P031 241 aaKnown RBP5.17□□□□□ -1.58
CLIP1-206ENST00000535290 NAGKQ9UJ70 344 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 PRELID1Q9Y255 219 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 URGCP-MRPS24S4R325 110 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 FAM25AB3EWG3 89 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 FAM25CB3EWG5 89 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 FAM25GB3EWG6 89 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 SEC11BP0C7V7 166 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 ANXA3P12429 323 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 RPL19P84098 196 aaKnown RBP5.16□□□□□ -1.58
CLIP1-206ENST00000535290 RAB31Q13636 194 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 NEDD8Q15843 81 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 Q6AWC8 147 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 SPINK6Q6UWN8 80 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 ENHOQ6UWT2 76 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 CYB561D1Q8N8Q1 229 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 SPACA4Q8TDM5 124 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 GTSF1Q8WW33 167 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 RNF185Q96GF1 192 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 MGST2Q99735 147 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 SH3BGRL3Q9H299 93 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 PLAC8Q9NZF1 115 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 RABL2BQ9UNT1 228 aa5.16□□□□□ -1.58
CLIP1-206ENST00000535290 A0A087WWC5 75 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 TRBV7-9A0A0J9YWB2 115 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 DUXBA0A1W2PPF3 345 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 FNDC10F2Z333 226 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 HLA-DQA1P01909 254 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 METTL15P1P0C7V9 234 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 PYYP10082 97 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 INPP1P49441 399 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 Q0VG73 95 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 SRSF9Q13242 221 aaKnown RBP eCLIP5.15□□□□□ -1.59
CLIP1-206ENST00000535290 ZNF876PQ49A33 203 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 IZUMO2Q6UXV1 221 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 PRRT1Q99946 306 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 PSENENQ9NZ42 101 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 EXTL2Q9UBQ6 330 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 VAX2Q9UIW0 290 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 TIMM9Q9Y5J7 89 aa5.15□□□□□ -1.59
CLIP1-206ENST00000535290 A0A087WX48 190 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 TYMSP04818 313 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 MGST1P10620 155 aaKnown RBP5.14□□□□□ -1.59
CLIP1-206ENST00000535290 ARL16Q0P5N6 197 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 PDE6HQ13956 83 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 ELOBQ15370 118 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 MIC13Q5XKP0 118 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 TMEM14EPQ6UXP3 125 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 CLVS1Q8IUQ0 354 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-206ENST00000535290 OR10G9Q8NGN4 311 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 SAMD10Q9BYL1 202 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 AAMDCQ9H7C9 122 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 MGAT4CQ9UBM8 478 aa5.14□□□□□ -1.59
CLIP1-206ENST00000535290 MUC21A0A0G2JKD1 596 aa5.13□□□□□ -1.59
CLIP1-206ENST00000535290 CIDEAO60543 219 aa5.13□□□□□ -1.59
CLIP1-206ENST00000535290 SLPIP03973 132 aa5.13□□□□□ -1.59
CLIP1-206ENST00000535290 HOXB5P09067 269 aa5.13□□□□□ -1.59
CLIP1-206ENST00000535290 AKAIN1P0CW23 69 aa5.13□□□□□ -1.59
CLIP1-206ENST00000535290 CAV2P51636 162 aa5.13□□□□□ -1.59
CLIP1-206ENST00000535290 C20orf85Q9H1P6 137 aa5.13□□□□□ -1.59
CLIP1-206ENST00000535290 TMEM14CQ9P0S9 112 aa5.13□□□□□ -1.59
CLIP1-206ENST00000535290 H7C1H1 209 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 SSSCA1O60232 199 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 CAMLGP49069 296 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 NCS1P62166 190 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 CNBPP62633 177 aaKnown RBP5.12□□□□□ -1.59
CLIP1-206ENST00000535290 SSBP1Q04837 148 aaKnown RBP5.12□□□□□ -1.59
CLIP1-206ENST00000535290 Q6ZRG5 221 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 OR2T35Q8NGX2 323 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 SMIM8Q96KF7 97 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 SCGB3A2Q96PL1 93 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 CHCHD7Q9BUK0 85 aa5.12□□□□□ -1.59
CLIP1-206ENST00000535290 GPN1Q9HCN4 374 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-206ENST00000535290 IGHV3-64A0A075B6Q5 118 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 PIGBOS1A0A0B4J2F0 54 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 PGPA6NDG6 321 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 PGPEP1LA6NFU8 196 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 TAAR5O14804 337 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 CTDSPLO15194 276 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 PRR4Q16378 134 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 ZNF506Q5JVG8 444 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 KRTAP26-1Q6PEX3 210 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 NRARPQ7Z6K4 114 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 C12orf45Q8N5I9 185 aaPredicted RBP5.11□□□□□ -1.59
CLIP1-206ENST00000535290 C14orf178Q8N769 122 aaPredicted RBP5.11□□□□□ -1.59
CLIP1-206ENST00000535290 C15orf54Q8N8G6 183 aa5.11□□□□□ -1.59
CLIP1-206ENST00000535290 OR1L4Q8NGR5 311 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms