RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 TCEAL7Q9BRU2 100 aa9.43□□□□□ -0.9
CAPN1-227ENST00000533909 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
CAPN1-227ENST00000533909 ARL2-SNX15V9GYD0 113 aa9.43□□□□□ -0.9
CAPN1-227ENST00000533909 RAB5CP51148 216 aa9.42□□□□□ -0.9
CAPN1-227ENST00000533909 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
CAPN1-227ENST00000533909 LINC00479Q96M42 142 aa9.42□□□□□ -0.9
CAPN1-227ENST00000533909 SPXQ9BT56 116 aa9.42□□□□□ -0.9
CAPN1-227ENST00000533909 MDFICQ9P1T7 246 aa9.42□□□□□ -0.9
CAPN1-227ENST00000533909 TRAV26-1A0A087WT03 109 aa9.41□□□□□ -0.9
CAPN1-227ENST00000533909 A0A0J9YY99 117 aa9.41□□□□□ -0.9
CAPN1-227ENST00000533909 PAGE4O60829 102 aa9.41□□□□□ -0.9
CAPN1-227ENST00000533909 IGLV2-11P01706 119 aa9.41□□□□□ -0.9
CAPN1-227ENST00000533909 PFN1P07737 140 aaKnown RBP9.41□□□□□ -0.9
CAPN1-227ENST00000533909 AKR1C3P42330 323 aa9.41□□□□□ -0.9
CAPN1-227ENST00000533909 TDRG1Q3Y452 100 aa9.41□□□□□ -0.9
CAPN1-227ENST00000533909 SLC51BQ86UW2 128 aa9.41□□□□□ -0.9
CAPN1-227ENST00000533909 FMC1Q96HJ9 113 aa9.41□□□□□ -0.9
CAPN1-227ENST00000533909 GNRH2O43555 120 aa9.4□□□□□ -0.9
CAPN1-227ENST00000533909 IGHV3-53P01767 116 aa9.4□□□□□ -0.9
CAPN1-227ENST00000533909 RNF212Q495C1 297 aa9.4□□□□□ -0.9
CAPN1-227ENST00000533909 Q86TA4 180 aa9.4□□□□□ -0.9
CAPN1-227ENST00000533909 DNAH1Q9P2D7 4330 aa9.4□□□□□ -0.91
CAPN1-227ENST00000533909 HOXA5P20719 270 aa9.39□□□□□ -0.91
CAPN1-227ENST00000533909 CCL18P55774 89 aa9.39□□□□□ -0.91
CAPN1-227ENST00000533909 C18orf15Q96N68 181 aa9.39□□□□□ -0.91
CAPN1-227ENST00000533909 ZFP30Q9Y2G7 519 aa9.39□□□□□ -0.91
CAPN1-227ENST00000533909 TRGV4A0A0C4DH28 118 aa9.38□□□□□ -0.91
CAPN1-227ENST00000533909 IGHV3-16A0A0C4DH30 117 aa9.38□□□□□ -0.91
CAPN1-227ENST00000533909 M0R2P5 195 aa9.38□□□□□ -0.91
CAPN1-227ENST00000533909 TYMSP04818 313 aa9.38□□□□□ -0.91
CAPN1-227ENST00000533909 S100A4P26447 101 aaKnown RBP9.38□□□□□ -0.91
CAPN1-227ENST00000533909 ZNF80P51504 273 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-227ENST00000533909 MANBALQ9NQG1 85 aa9.38□□□□□ -0.91
CAPN1-227ENST00000533909 GNG13Q9P2W3 67 aa9.38□□□□□ -0.91
CAPN1-227ENST00000533909 FABP5P3A8MUU1 101 aa9.37□□□□□ -0.91
CAPN1-227ENST00000533909 IFNA1P01562 189 aa9.37□□□□□ -0.91
CAPN1-227ENST00000533909 ORM1P02763 201 aa9.37□□□□□ -0.91
CAPN1-227ENST00000533909 S100A9P06702 114 aaKnown RBP9.37□□□□□ -0.91
CAPN1-227ENST00000533909 SULT1A2P50226 295 aa9.37□□□□□ -0.91
CAPN1-227ENST00000533909 FAM3BP58499 235 aaPredicted RBP9.37□□□□□ -0.91
CAPN1-227ENST00000533909 SLAQ13239 276 aa9.37□□□□□ -0.91
CAPN1-227ENST00000533909 C9orf62Q8N4C0 152 aa9.37□□□□□ -0.91
CAPN1-227ENST00000533909 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
CAPN1-227ENST00000533909 C9JCJ5 164 aa9.36□□□□□ -0.91
CAPN1-227ENST00000533909 H3BNG1 76 aa9.36□□□□□ -0.91
CAPN1-227ENST00000533909 PAX4O43316 350 aa9.36□□□□□ -0.91
CAPN1-227ENST00000533909 FAM162BQ5T6X4 162 aa9.36□□□□□ -0.91
CAPN1-227ENST00000533909 OR4C5Q8NGB2 326 aa9.36□□□□□ -0.91
CAPN1-227ENST00000533909 RASL10AQ92737 203 aa9.36□□□□□ -0.91
CAPN1-227ENST00000533909 IGLV2-18A0A075B6J9 118 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 SCO2A0A1W2PP80 73 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 B4DEV8 164 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 M0R2N4 97 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 ASIPP42127 132 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 ZNF876PQ49A33 203 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 ZC2HC1AQ96GY0 325 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 MUC4Q99102 2169 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 PRO0255Q9UI72 69 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 HHLA3Q9XRX5 114 aa9.35□□□□□ -0.91
CAPN1-227ENST00000533909 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 TRBV6-1A0A0K0K1D8 114 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 A0A1B0GVG6 124 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 M0R036 132 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 SH2D1AO60880 128 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 LTAP01374 205 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 SFTA3P0C7M3 94 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 CCL20P78556 96 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 NHLRC2Q8NBF2 726 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 PCNPQ8WW12 178 aaKnown RBP9.34□□□□□ -0.91
CAPN1-227ENST00000533909 TXNDC17Q9BRA2 123 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
CAPN1-227ENST00000533909 TRAV4A0A0B4J268 109 aa9.33□□□□□ -0.92
CAPN1-227ENST00000533909 BAGE2Q86Y30 109 aa9.33□□□□□ -0.92
CAPN1-227ENST00000533909 ZNF479Q96JC4 524 aa9.33□□□□□ -0.92
CAPN1-227ENST00000533909 CRYBA4P53673 196 aa9.32□□□□□ -0.92
CAPN1-227ENST00000533909 FHL2Q14192 279 aa9.32□□□□□ -0.92
CAPN1-227ENST00000533909 VSIG2Q96IQ7 327 aa9.32□□□□□ -0.92
CAPN1-227ENST00000533909 LINC00588Q9Y4M8 146 aa9.32□□□□□ -0.92
CAPN1-227ENST00000533909 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
CAPN1-227ENST00000533909 IGKV3D-20A0A0C4DH25 116 aa9.31□□□□□ -0.92
CAPN1-227ENST00000533909 PDE6DO43924 150 aa9.31□□□□□ -0.92
CAPN1-227ENST00000533909 TAGLN2P37802 199 aaKnown RBP9.31□□□□□ -0.92
CAPN1-227ENST00000533909 RPL35P42766 123 aaKnown RBP9.31□□□□□ -0.92
CAPN1-227ENST00000533909 NKX2-5P52952 324 aaPredicted RBP9.31□□□□□ -0.92
CAPN1-227ENST00000533909 MEF2BQ02080 365 aaPredicted RBP9.31□□□□□ -0.92
CAPN1-227ENST00000533909 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
CAPN1-227ENST00000533909 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
CAPN1-227ENST00000533909 ALKAL2Q6UX46 152 aa9.31□□□□□ -0.92
CAPN1-227ENST00000533909 COX8CQ7Z4L0 72 aa9.31□□□□□ -0.92
CAPN1-227ENST00000533909 SYT8Q8NBV8 401 aa9.31□□□□□ -0.92
CAPN1-227ENST00000533909 C9orf85Q96MD7 179 aa9.31□□□□□ -0.92
CAPN1-227ENST00000533909 A0A096LPF7 62 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 GRIFINA4D1Z8 144 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 KRBOX1C9JBD0 128 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 H3BVH4 76 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 BCL2P10415 239 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 SRIP30626 198 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 CRIP1P50238 77 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 BLOC1S1P78537 153 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms