RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
CSDE1-215ENST00000533818 AGPAT2O15120 278 aa6.35□□□□□ -1.39
CSDE1-215ENST00000533818 MED6O75586 246 aa6.35□□□□□ -1.39
CSDE1-215ENST00000533818 NDUFB4O95168 129 aa6.35□□□□□ -1.39
CSDE1-215ENST00000533818 SLC38A11Q08AI6 406 aa6.35□□□□□ -1.39
CSDE1-215ENST00000533818 OR2T35Q8NGX2 323 aa6.35□□□□□ -1.39
CSDE1-215ENST00000533818 KCNIP3Q9Y2W7 256 aa6.35□□□□□ -1.39
CSDE1-215ENST00000533818 STRAPQ9Y3F4 350 aaKnown RBP6.35□□□□□ -1.39
CSDE1-215ENST00000533818 TRAV1-1A0A0B4J248 108 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 SMIM31A0A1B0GVY4 71 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 DIRC3C9JPN6 131 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 H3BP45 60 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 CTDSPLO15194 276 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 TMEM127O75204 238 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 FER1L6-AS1Q8NA97 138 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 AAMDCQ9H7C9 122 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 NPVFQ9HCQ7 196 aa6.34□□□□□ -1.39
CSDE1-215ENST00000533818 TYMSP04818 313 aa6.33□□□□□ -1.4
CSDE1-215ENST00000533818 CRYGAP11844 174 aa6.33□□□□□ -1.4
CSDE1-215ENST00000533818 TBPP20226 339 aa6.33□□□□□ -1.4
CSDE1-215ENST00000533818 RRAS2P62070 204 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-215ENST00000533818 MPV17L2Q567V2 206 aa6.33□□□□□ -1.4
CSDE1-215ENST00000533818 DIRC1Q969H9 104 aa6.33□□□□□ -1.4
CSDE1-215ENST00000533818 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
CSDE1-215ENST00000533818 A0A087WWL8 130 aa6.32□□□□□ -1.4
CSDE1-215ENST00000533818 SYNGR2O43760 224 aa6.32□□□□□ -1.4
CSDE1-215ENST00000533818 CLPSL2Q6UWE3 100 aa6.32□□□□□ -1.4
CSDE1-215ENST00000533818 C14orf178Q8N769 122 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-215ENST00000533818 OR2G3Q8NGZ4 309 aa6.32□□□□□ -1.4
CSDE1-215ENST00000533818 SOSTQ9BQB4 213 aa6.32□□□□□ -1.4
CSDE1-215ENST00000533818 LINC00474Q9P2X8 69 aa6.32□□□□□ -1.4
CSDE1-215ENST00000533818 A0A096LNI7 61 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 LOC100506127A0A0U1RQW1 187 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 PGPEP1LA6NFU8 196 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 RPS10P46783 165 aaKnown RBP6.31□□□□□ -1.4
CSDE1-215ENST00000533818 CAV2P51636 162 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 UBE2D1P51668 147 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 PDE6HQ13956 83 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 ZNF506Q5JVG8 444 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 ZFP2Q6ZN57 461 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 OR10G7Q8NGN6 311 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 PRR34Q9NV39 138 aa6.31□□□□□ -1.4
CSDE1-215ENST00000533818 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 RAB3DO95716 219 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 MT-ND6P03923 174 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 RPL13AP40429 203 aaKnown RBP6.3□□□□□ -1.4
CSDE1-215ENST00000533818 SRPXP78539 464 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 IZUMO2Q6UXV1 221 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 LINC00269Q8N2A0 174 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 ASB13Q8WXK3 278 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 KCNS1Q96KK3 526 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 PARLQ9H300 379 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 GPN1Q9HCN4 374 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-215ENST00000533818 GPR132Q9UNW8 380 aa6.3□□□□□ -1.4
CSDE1-215ENST00000533818 CROCCP3Q8IVE0 287 aa6.29□□□□□ -1.4
CSDE1-215ENST00000533818 CCDC59Q9P031 241 aaKnown RBP6.29□□□□□ -1.4
CSDE1-215ENST00000533818 MGAT4CQ9UBM8 478 aa6.29□□□□□ -1.4
CSDE1-215ENST00000533818 TRAV21A0A0B4J279 112 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 FAM24AA6NFZ4 105 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 FNDC10F2Z333 226 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 PYYP10082 97 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 C1orf137Q5JT78 98 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 Q6ZRG5 221 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 C12orf45Q8N5I9 185 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-215ENST00000533818 PTH2Q96A98 100 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 C9orf85Q96MD7 179 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 TMEM14CQ9P0S9 112 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 LENEPQ9Y5L5 61 aa6.28□□□□□ -1.4
CSDE1-215ENST00000533818 TRBV6-8A0A0A6YYG3 113 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 RBAKDNA6NC62 111 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 H0Y9J4 135 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 SLC25A6P12236 298 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 TPRXLQ17RH7 258 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 FAAP20Q6NZ36 180 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 ARL6IP6Q8N6S5 226 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 TMEM229BQ8NBD8 167 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 OR1L4Q8NGR5 311 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 SUN5Q8TC36 379 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 CHCHD5Q9BSY4 110 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 GFRA4Q9GZZ7 299 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 VCXQ9H320 206 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 MTFP1Q9UDX5 166 aa6.27□□□□□ -1.41
CSDE1-215ENST00000533818 A8MWV9 139 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 CSN1S1P47710 185 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 TAS2R19P59542 299 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 PKIAP61925 76 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 SPCS2Q15005 226 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 MGST2Q99735 147 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 MLST8Q9BVC4 326 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 PSENENQ9NZ42 101 aa6.26□□□□□ -1.41
CSDE1-215ENST00000533818 PIGBOS1A0A0B4J2F0 54 aa6.25□□□□□ -1.41
CSDE1-215ENST00000533818 APOA1P02647 267 aa6.25□□□□□ -1.41
CSDE1-215ENST00000533818 ANXA3P12429 323 aa6.25□□□□□ -1.41
CSDE1-215ENST00000533818 RAB5CP51148 216 aa6.25□□□□□ -1.41
CSDE1-215ENST00000533818 LGALSLQ3ZCW2 172 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-215ENST00000533818 PFDN5Q99471 154 aa6.25□□□□□ -1.41
CSDE1-215ENST00000533818 COMMD3Q9UBI1 195 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms