RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TMEM183AQ8IXX5 376 aa14.34□□□□□ -0.11
CCS-208ENST00000533244 PAGE4O60829 102 aa14.33□□□□□ -0.11
CCS-208ENST00000533244 GCGP01275 180 aa14.33□□□□□ -0.11
CCS-208ENST00000533244 HOXA5P20719 270 aa14.33□□□□□ -0.11
CCS-208ENST00000533244 PPT1P50897 306 aa14.33□□□□□ -0.11
CCS-208ENST00000533244 SMUG1Q53HV7 270 aa14.33□□□□□ -0.11
CCS-208ENST00000533244 Q86TA4 180 aa14.33□□□□□ -0.11
CCS-208ENST00000533244 C11orf21Q9P2W6 132 aa14.33□□□□□ -0.11
CCS-208ENST00000533244 NAGKQ9UJ70 344 aa14.33□□□□□ -0.11
CCS-208ENST00000533244 TRAV1-1A0A0B4J248 108 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 PFN1P07737 140 aaKnown RBP14.32□□□□□ -0.12
CCS-208ENST00000533244 SULT1A2P50226 295 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 ZFP69Q49AA0 526 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 CST9LP1Q5W188 147 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 IGHV3-16A0A0C4DH30 117 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 A0A1B0GV50 99 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 TYMSP04818 313 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 KCNS1Q96KK3 526 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 SPXQ9BT56 116 aa14.32□□□□□ -0.12
CCS-208ENST00000533244 MRPL16Q9NX20 251 aaKnown RBP14.32□□□□□ -0.12
CCS-208ENST00000533244 MUC4Q99102 2169 aa14.31□□□□□ -0.12
CCS-208ENST00000533244 TRGV2A0A075B6R0 118 aa14.31□□□□□ -0.12
CCS-208ENST00000533244 TRBV6-1A0A0K0K1D8 114 aa14.31□□□□□ -0.12
CCS-208ENST00000533244 GNRH2O43555 120 aa14.31□□□□□ -0.12
CCS-208ENST00000533244 COX8CQ7Z4L0 72 aa14.31□□□□□ -0.12
CCS-208ENST00000533244 POM121L12Q8N7R1 296 aa14.31□□□□□ -0.12
CCS-208ENST00000533244 SDF2L1Q9HCN8 221 aa14.31□□□□□ -0.12
CCS-208ENST00000533244 FMC1Q96HJ9 113 aa14.3□□□□□ -0.12
CCS-208ENST00000533244 CCL20P78556 96 aa14.29□□□□□ -0.12
CCS-208ENST00000533244 OR5I1Q13606 314 aa14.29□□□□□ -0.12
CCS-208ENST00000533244 RASL10AQ92737 203 aa14.29□□□□□ -0.12
CCS-208ENST00000533244 ZFP30Q9Y2G7 519 aa14.29□□□□□ -0.12
CCS-208ENST00000533244 TRAV26-1A0A087WT03 109 aa14.28□□□□□ -0.12
CCS-208ENST00000533244 H3BNG1 76 aa14.28□□□□□ -0.12
CCS-208ENST00000533244 RNF212Q495C1 297 aa14.28□□□□□ -0.12
CCS-208ENST00000533244 UBE2G1P62253 170 aa14.27□□□□□ -0.12
CCS-208ENST00000533244 LTAP01374 205 aa14.26□□□□□ -0.13
CCS-208ENST00000533244 AKR1C3P42330 323 aa14.26□□□□□ -0.13
CCS-208ENST00000533244 ZC2HC1AQ96GY0 325 aa14.26□□□□□ -0.13
CCS-208ENST00000533244 MANBALQ9NQG1 85 aa14.26□□□□□ -0.13
CCS-208ENST00000533244 SCO2A0A1W2PP80 73 aa14.25□□□□□ -0.13
CCS-208ENST00000533244 FABP5P3A8MUU1 101 aa14.25□□□□□ -0.13
CCS-208ENST00000533244 M0R2P5 195 aa14.25□□□□□ -0.13
CCS-208ENST00000533244 NUDT3O95989 172 aa14.25□□□□□ -0.13
CCS-208ENST00000533244 CRIP1P50238 77 aa14.25□□□□□ -0.13
CCS-208ENST00000533244 VSIG2Q96IQ7 327 aa14.25□□□□□ -0.13
CCS-208ENST00000533244 DNAH10Q8IVF4 4471 aa14.25□□□□□ -0.13
CCS-208ENST00000533244 NACAE9PAV3 2078 aa14.24□□□□□ -0.13
CCS-208ENST00000533244 IGKV3D-20A0A0C4DH25 116 aa14.24□□□□□ -0.13
CCS-208ENST00000533244 C9orf85Q96MD7 179 aa14.24□□□□□ -0.13
CCS-208ENST00000533244 GNG13Q9P2W3 67 aa14.24□□□□□ -0.13
CCS-208ENST00000533244 A0A0J9YY99 117 aa14.24□□□□□ -0.13
CCS-208ENST00000533244 TEX46H3BTG2 121 aa14.24□□□□□ -0.13
CCS-208ENST00000533244 S100A9P06702 114 aaKnown RBP14.24□□□□□ -0.13
CCS-208ENST00000533244 UBE2DNLQ8IWF7 75 aa14.24□□□□□ -0.13
CCS-208ENST00000533244 IGHV3-53P01767 116 aa14.23□□□□□ -0.13
CCS-208ENST00000533244 FAM3BP58499 235 aaPredicted RBP14.23□□□□□ -0.13
CCS-208ENST00000533244 FHL2Q14192 279 aa14.23□□□□□ -0.13
CCS-208ENST00000533244 C11orf52Q96A22 123 aa14.23□□□□□ -0.13
CCS-208ENST00000533244 TXNDC17Q9BRA2 123 aa14.23□□□□□ -0.13
CCS-208ENST00000533244 EPPK1P58107 5090 aaKnown RBP14.22□□□□□ -0.13
CCS-208ENST00000533244 RNASE3P12724 160 aaKnown RBP14.22□□□□□ -0.13
CCS-208ENST00000533244 ZNF674Q2M3X9 581 aa14.22□□□□□ -0.13
CCS-208ENST00000533244 PTH2Q96A98 100 aa14.22□□□□□ -0.13
CCS-208ENST00000533244 TRAV4A0A0B4J268 109 aa14.21□□□□□ -0.13
CCS-208ENST00000533244 SH2D1AO60880 128 aa14.21□□□□□ -0.13
CCS-208ENST00000533244 NKX2-5P52952 324 aaPredicted RBP14.21□□□□□ -0.13
CCS-208ENST00000533244 FAM162BQ5T6X4 162 aa14.21□□□□□ -0.13
CCS-208ENST00000533244 ZNF479Q96JC4 524 aa14.21□□□□□ -0.13
CCS-208ENST00000533244 MLST8Q9BVC4 326 aa14.21□□□□□ -0.13
CCS-208ENST00000533244 PRO0255Q9UI72 69 aa14.21□□□□□ -0.13
CCS-208ENST00000533244 CRYBA4P53673 196 aa14.2□□□□□ -0.14
CCS-208ENST00000533244 SLAQ13239 276 aa14.2□□□□□ -0.14
CCS-208ENST00000533244 A0A096LPF7 62 aa14.19□□□□□ -0.14
CCS-208ENST00000533244 KRBOX1C9JBD0 128 aa14.19□□□□□ -0.14
CCS-208ENST00000533244 SFTA3P0C7M3 94 aa14.19□□□□□ -0.14
CCS-208ENST00000533244 DNLZQ5SXM8 178 aa14.19□□□□□ -0.14
CCS-208ENST00000533244 ALKAL2Q6UX46 152 aa14.19□□□□□ -0.14
CCS-208ENST00000533244 ZNF575Q86XF7 245 aa14.19□□□□□ -0.14
CCS-208ENST00000533244 LINC00588Q9Y4M8 146 aa14.19□□□□□ -0.14
CCS-208ENST00000533244 FRAS1Q86XX4 4008 aa14.18□□□□□ -0.14
CCS-208ENST00000533244 CCL18P55774 89 aa14.18□□□□□ -0.14
CCS-208ENST00000533244 ZNF876PQ49A33 203 aa14.18□□□□□ -0.14
CCS-208ENST00000533244 HHLA3Q9XRX5 114 aa14.18□□□□□ -0.14
CCS-208ENST00000533244 DNAH2Q9P225 4427 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 B4DEV8 164 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 PAX4O43316 350 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 IFNA1P01562 189 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 ORM1P02763 201 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 BCL2P10415 239 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 MEF2BQ02080 365 aaPredicted RBP14.17□□□□□ -0.14
CCS-208ENST00000533244 LINC01559Q495D7 138 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 BAGE2Q86Y30 109 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 NHLRC2Q8NBF2 726 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 ZNRF2Q8NHG8 242 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 BOLA1Q9Y3E2 137 aa14.17□□□□□ -0.14
CCS-208ENST00000533244 TRGV4A0A0C4DH28 118 aa14.16□□□□□ -0.14
CCS-208ENST00000533244 PGPEP1LA6NFU8 196 aa14.16□□□□□ -0.14
CCS-208ENST00000533244 ASIPP42127 132 aa14.16□□□□□ -0.14
CCS-208ENST00000533244 RPL35P42766 123 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms