RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 GP9P14770 177 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 SIGMAR1Q99720 223 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 PRSS57Q6UWY2 283 aa11.61□□□□□ -0.55
PCDHA9-202ENST00000532602 C18orf32Q8TCD1 76 aa11.61□□□□□ -0.55
PCDHA9-202ENST00000532602 IGLC7A0M8Q6 106 aa11.61□□□□□ -0.55
PCDHA9-202ENST00000532602 BLCAPP62952 87 aa11.61□□□□□ -0.55
PCDHA9-202ENST00000532602 ZNF493Q6ZR52 646 aa11.61□□□□□ -0.55
PCDHA9-202ENST00000532602 MPV17L2Q567V2 206 aa11.61□□□□□ -0.55
PCDHA9-202ENST00000532602 PIFOQ8TCI5 191 aa11.61□□□□□ -0.55
PCDHA9-202ENST00000532602 ANAPC13Q9BS18 74 aa11.61□□□□□ -0.55
PCDHA9-202ENST00000532602 ZNF48Q96MX3 618 aaPredicted RBP11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 RBAKDNA6NC62 111 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 INAFM2P0DMQ5 153 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 SH2D6Q7Z4S9 175 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 APRG1Q8IVJ8 170 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 NOP10Q9NPE3 64 aaKnown RBP11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 NDUFA12Q9UI09 145 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 NXPH4O95158 308 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 LOC105371267A0A1B0GV96 52 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
PCDHA9-202ENST00000532602 IGKV2D-24A0A075B6R9 120 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 C9JQL5 133 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 NPBQ8NG41 125 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 RNF138Q8WVD3 245 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 SPART-AS1P0CW21 52 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 ADCYAP1P18509 176 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 NAA38Q9BRA0 125 aaKnown RBP11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 SOCS3O14543 225 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 PRR20EP86478 221 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 PRR20CP86479 221 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 PRR20DP86480 221 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 PRR20BP86481 221 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 PRR20AP86496 221 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 U3KQE9 123 aa11.59□□□□□ -0.55
PCDHA9-202ENST00000532602 KRTAP27-1Q3LI81 207 aa11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 ZC2HC1AQ96GY0 325 aa11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 PRORYQ9H606 182 aa11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 CCL18P55774 89 aa11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 STPG4Q8N801 248 aa11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 C1orf43Q9BWL3 253 aa11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 SPRY2O43597 315 aa11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 ATP5G1P05496 136 aa11.58□□□□□ -0.56
PCDHA9-202ENST00000532602 CEP192Q8TEP8 1941 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 IGKV1OR2-108A0A075B7D4 117 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 GAGE2AQ6NT46 116 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 MRPL52Q86TS9 123 aaKnown RBP11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 PLA2G5P39877 138 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 UBE2BP63146 152 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 HIST2H2BCQ6DN03 193 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 EDA2RQ9HAV5 297 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 SHANK1Q9Y566 2161 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 A0A0J9YY99 117 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 C19orf84I3L1E1 186 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 MRPL23Q16540 153 aaKnown RBP11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 OCIAD2Q56VL3 154 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 IGHV7-81A0A0B4J1V7 117 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 CD5LO43866 347 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 AGPAT4-IT1Q9H0P7 198 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 V9GYV3 84 aa11.57□□□□□ -0.56
PCDHA9-202ENST00000532602 C9JAW5 83 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 WIPF2Q8TF74 440 aaPredicted RBP11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 C16orf74Q96GX8 76 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 CUL9Q8IWT3 2517 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 SMIM27A0A1W2PRY6 76 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 IGLV2-23P01705 113 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 HIVEP2P31629 2446 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 K7EMI3 77 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 TAL2Q16559 108 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 ZFAND6Q6FIF0 208 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 SCRT2Q9NQ03 307 aa11.56□□□□□ -0.56
PCDHA9-202ENST00000532602 CACNA1AO00555 2505 aa11.55□□□□□ -0.56
PCDHA9-202ENST00000532602 MYCNOSP40205 109 aa11.55□□□□□ -0.56
PCDHA9-202ENST00000532602 TRBV20-1A0A075B6N2 111 aa11.55□□□□□ -0.56
PCDHA9-202ENST00000532602 F8VRH5 84 aa11.55□□□□□ -0.56
PCDHA9-202ENST00000532602 ICOSQ9Y6W8 199 aa11.55□□□□□ -0.56
PCDHA9-202ENST00000532602 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
PCDHA9-202ENST00000532602 FBXL19-AS1Q494R0 122 aa11.55□□□□□ -0.56
PCDHA9-202ENST00000532602 AJUBAQ96IF1 538 aa11.55□□□□□ -0.56
PCDHA9-202ENST00000532602 DYNAPQ8N1N2 210 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 TMEM89A2RUT3 159 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 GNRH2O43555 120 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 LGALS9BQ3B8N2 356 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 LGALS9CQ6DKI2 356 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 UBE2WQ96B02 151 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 LTAP01374 205 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 SPG11Q96JI7 2443 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 PCDH15Q96QU1 1955 aa11.54□□□□□ -0.56
PCDHA9-202ENST00000532602 NPYP01303 97 aa11.53□□□□□ -0.56
PCDHA9-202ENST00000532602 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
PCDHA9-202ENST00000532602 SIGLEC8Q9NYZ4 499 aa11.53□□□□□ -0.56
PCDHA9-202ENST00000532602 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
PCDHA9-202ENST00000532602 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
PCDHA9-202ENST00000532602 CLPSL1A2RUU4 121 aa11.52□□□□□ -0.56
PCDHA9-202ENST00000532602 Q9HAA7 133 aa11.52□□□□□ -0.56
PCDHA9-202ENST00000532602 IGLV11-55A0A075B6I3 123 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms