RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PLA2G5P39877 138 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 ZNF503Q96F45 646 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 WI2-2373I1.2A0A1W2PRP0 233 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 ESDP10768 282 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 FOXE3Q13461 319 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 CFAP161Q6P656 301 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 MORN3Q6PF18 240 aaPredicted RBP11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 IGKV1D-37A0A075B6S9 117 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 DAZAP2Q15038 168 aaPredicted RBP11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 ZNF747Q9BV97 191 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 XCL2Q9UBD3 114 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 KIR2DL5BA0A0G2JN68 375 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 KIR2DL5BA0A0G2JPC4 375 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 F6UB75 175 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 RNASE1P07998 156 aaKnown RBP11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 KIR2DL5AQ8N109 375 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 LY6G5BQ8NDX9 201 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 C10orf105Q8TEF2 133 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 PHLDA1Q8WV24 401 aaPredicted RBP11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 CFHR4Q92496 578 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 C1orf159Q96HA4 380 aa11.94□□□□□ -0.5
PCDHA3-202ENST00000532566 CEP295Q9C0D2 2601 aa11.93□□□□□ -0.5
PCDHA3-202ENST00000532566 VPREB3Q9UKI3 123 aa11.93□□□□□ -0.5
PCDHA3-202ENST00000532566 HCFC1P51610 2035 aa11.93□□□□□ -0.5
PCDHA3-202ENST00000532566 CCDC168Q8NDH2 2452 aa11.93□□□□□ -0.5
PCDHA3-202ENST00000532566 BLCAPP62952 87 aa11.93□□□□□ -0.5
PCDHA3-202ENST00000532566 C5orf56Q8N8D9 126 aa11.93□□□□□ -0.5
PCDHA3-202ENST00000532566 MRPL35Q9NZE8 188 aaKnown RBP11.93□□□□□ -0.5
PCDHA3-202ENST00000532566 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 FANCD2OSQ96PS1 177 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 C20orf78Q9BR46 151 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 SIRPDQ9H106 197 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 NAV2Q8IVL1 2488 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 A8MWV9 139 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 PMVKQ15126 192 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 TMEM141Q96I45 108 aa11.92□□□□□ -0.5
PCDHA3-202ENST00000532566 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 F8VRH5 84 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 PAX2Q02962 417 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 KIAA1549Q9HCM3 1950 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 SPXQ9BT56 116 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 FRMD6-AS1P0C7T7 363 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 TMEM95Q3KNT9 176 aa11.91□□□□□ -0.5
PCDHA3-202ENST00000532566 MALP21145 153 aa11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 RASL10AQ92737 203 aa11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 I3L3M4 83 aa11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 M0R2P5 195 aa11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 ZNF48Q96MX3 618 aaPredicted RBP11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 RBMY1BA6NDE4 496 aaKnown RBP11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 RBMY1EA6NEQ0 496 aaKnown RBP11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 RBMY1DP0C7P1 496 aaKnown RBP11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 RBMY1A1P0DJD3 496 aaKnown RBP11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 RBMY1CP0DJD4 496 aa11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 NEGR1Q7Z3B1 354 aa11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 AJUBAQ96IF1 538 aa11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 RNF114Q9Y508 228 aa11.9□□□□□ -0.5
PCDHA3-202ENST00000532566 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 DSCAMO60469 2012 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 TRAV8-2A0A0B4J237 113 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 C16orf54Q6UWD8 224 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 A0A087WX48 190 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 GAGE12BA1L429 117 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 MYO9AB2RTY4 2548 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 GNRH2O43555 120 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 HOXD3P31249 432 aaPredicted RBP11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 RIPPLY3P57055 190 aa11.89□□□□□ -0.51
PCDHA3-202ENST00000532566 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 LGALS1P09382 135 aaKnown RBP11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 HLA-DRB4P13762 266 aa11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 DKK2Q9UBU2 259 aa11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 HLA-DRB4X5D2U9 266 aa11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 NAV3Q8IVL0 2385 aa11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 FSTL3O95633 263 aa11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 MSRB1Q9NZV6 116 aa11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 DLX4Q92988 240 aaPredicted RBP11.88□□□□□ -0.51
PCDHA3-202ENST00000532566 ZNF493Q6ZR52 646 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 TNRC6AQ8NDV7 1962 aaKnown RBP11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 DOPEY1Q5JWR5 2465 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 TRBV6-1A0A0K0K1D8 114 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 MYMXA0A1B0GTQ4 84 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 PRAC2D3DTV9 90 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 GATA1P15976 413 aaPredicted RBP11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 LINC00158P58513 81 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 NPC2P61916 151 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 FOXI2Q6ZQN5 318 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 ATG2AQ2TAZ0 1938 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 C19orf71A6NCJ1 209 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 ODF3BA8MYP8 253 aa11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
PCDHA3-202ENST00000532566 IGHV3-16A0A0C4DH30 117 aa11.86□□□□□ -0.51
PCDHA3-202ENST00000532566 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
PCDHA3-202ENST00000532566 EML5Q05BV3 1969 aa11.86□□□□□ -0.51
PCDHA3-202ENST00000532566 HIVEP2P31629 2446 aa11.86□□□□□ -0.51
PCDHA3-202ENST00000532566 IGLV2-8P01709 118 aa11.86□□□□□ -0.51
PCDHA3-202ENST00000532566 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms