RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 PFN1P07737 140 aaKnown RBP5.24□□□□□ -1.57
CD44-232ENST00000531118 FOXI1Q12951 378 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 PPP1R1AQ13522 171 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 RAB32Q13637 225 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 BAK1Q16611 211 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 C4orf46Q504U0 113 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 FFAR4Q5NUL3 377 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 FAM122CQ6P4D5 195 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 LINC00299Q6ZSB3 139 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 LINC00305Q7Z4B0 112 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 OR4C5Q8NGB2 326 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 S100ZQ8WXG8 99 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 MRPL53Q96EL3 112 aaKnown RBP5.24□□□□□ -1.57
CD44-232ENST00000531118 SAT2Q96F10 170 aaPredicted RBP5.24□□□□□ -1.57
CD44-232ENST00000531118 DNAJC30Q96LL9 226 aa5.24□□□□□ -1.57
CD44-232ENST00000531118 A0A087WWL8 130 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 C9orf170A2RU37 121 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 PITX3O75364 302 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 HOXB5P09067 269 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 IL7P13232 177 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 SLC38A11Q08AI6 406 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 C14orf177Q52M58 125 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 MUC21Q5SSG8 566 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 SPXQ9BT56 116 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 CCDC32Q9BV29 185 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 AGPAT4-IT1Q9H0P7 198 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 GTSF1LQ9H1H1 148 aa5.23□□□□□ -1.57
CD44-232ENST00000531118 K7EPK0 472 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 WRBO00258 174 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 LYRM1O43325 122 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 SYNGR2O43760 224 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 ZNF253O75346 499 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 NMBP08949 121 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 RHOHQ15669 191 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 TMEM183BQ1AE95 376 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 SPANXN5Q5MJ07 72 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 MZT2BQ6NZ67 158 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 WDR73Q6P4I2 378 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 TMEM183AQ8IXX5 376 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 KIF25-AS1Q9Y6Z4 181 aa5.22□□□□□ -1.57
CD44-232ENST00000531118 IGKV2-40A0A087WW87 121 aaPredicted RBP5.21□□□□□ -1.58
CD44-232ENST00000531118 FBLL1A6NHQ2 334 aaKnown RBP5.21□□□□□ -1.58
CD44-232ENST00000531118 COX7A2P2O60397 106 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 IGKV2D-40P01614 121 aaPredicted RBP5.21□□□□□ -1.58
CD44-232ENST00000531118 KRTAP10-8P60410 259 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 CIRBPQ14011 172 aaKnown RBP5.21□□□□□ -1.58
CD44-232ENST00000531118 GUK1Q16774 197 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 VWC2Q2TAL6 325 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 PXDC1Q5TGL8 231 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 ZNF546Q86UE3 836 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 SLC25A29Q8N8R3 303 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 LINC00477Q96M19 166 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 SDHCQ99643 169 aaPredicted RBP5.21□□□□□ -1.58
CD44-232ENST00000531118 PRADC1Q9BSG0 188 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 OR51M1Q9H341 326 aa5.21□□□□□ -1.58
CD44-232ENST00000531118 STRAPQ9Y3F4 350 aaKnown RBP5.21□□□□□ -1.58
CD44-232ENST00000531118 FAM240BA0A1B0GVZ2 78 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 AGPAT2O15120 278 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 TCRBP04435 133 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 OR10J4P0C629 311 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 LINC00694P0DN24 101 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 RRAS2P62070 204 aaPredicted RBP5.2□□□□□ -1.58
CD44-232ENST00000531118 TMEM78Q5T7P6 136 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 ATRAIDQ6UW56 229 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 Q8TAT8 98 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 ZC2HC1AQ96GY0 325 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 C20orf85Q9H1P6 137 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 BATF3Q9NR55 127 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 FLVCR2Q9UPI3 526 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
CD44-232ENST00000531118 TRBV19A0A075B6N1 114 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 C5orf51A6NDU8 294 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 M0R2P5 195 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 PHOX2AO14813 284 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 POLR2GP62487 172 aaKnown RBP eCLIP5.19□□□□□ -1.58
CD44-232ENST00000531118 IAH1Q2TAA2 248 aaPredicted RBP5.19□□□□□ -1.58
CD44-232ENST00000531118 C10orf113Q5VZT2 155 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 C9orf163Q8N9P6 203 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 MITD1Q8WV92 249 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 NUDT15Q9NV35 164 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 PSENENQ9NZ42 101 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 GSKIPQ9P0R6 139 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 ZNF492Q9P255 531 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 PRELID1Q9Y255 219 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
CD44-232ENST00000531118 TRAV6A0A075B6T7 132 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 TRBV6-4A0A1B0GX49 114 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 FAM25EA8MYX2 175 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 USP17L23D6RBM5 183 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 L7N2F9 121 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 PLA2G10O15496 165 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 SSSCA1O60232 199 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 NDUFB4O95168 129 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 SEC11BP0C7V7 166 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 HIST1H1EP10412 219 aaKnown RBP5.18□□□□□ -1.58
CD44-232ENST00000531118 PVALBP20472 110 aaPredicted RBP5.18□□□□□ -1.58
CD44-232ENST00000531118 BTCP35070 178 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 TAS2R30P59541 319 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 VAMP2P63027 116 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 PRR3P79522 188 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms