RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 RNF182Q8N6D2 247 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 OR8A1Q8NGG7 326 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 DPF1Q92782 380 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 MRAP2Q96G30 205 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 URB1-AS1Q96HZ7 61 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 FAM19A4Q96LR4 140 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 TPPP3Q9BW30 176 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 KLK15Q9H2R5 256 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 MS4A6AQ9H2W1 248 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 MAP1LC3AQ9H492 121 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 ST20Q9HBF5 79 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 SPTAN1Q13813 2472 aaKnown RBP4.21□□□□□ -1.74
PCF11-205ENST00000530906 MYO18BQ8IUG5 2567 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 DCHS2Q6V1P9 2916 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 TMSB15BA0A087X1C1 80 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 D6R8Y8 96 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 ZNF207O43670 478 aaKnown RBP4.2□□□□□ -1.74
PCF11-205ENST00000530906 DUSP14O95147 198 aaKnown RBP4.2□□□□□ -1.74
PCF11-205ENST00000530906 TRBV12-3P01733 135 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 IGHV3-11P01762 117 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 HBDP02042 147 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 PRB1P04280 392 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 IGLC3P0DOY3 106 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 HLA-DMBP28068 263 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 TSPOP30536 169 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 LEPP41159 167 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 ASIPP42127 132 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 ERCC8Q13216 396 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 MRPL51Q4U2R6 128 aaKnown RBP4.2□□□□□ -1.74
PCF11-205ENST00000530906 SPATA45Q537H7 98 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 LINC01545Q5VT33 79 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 EBLN2Q6P2I7 272 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 ZFAND2AQ8N6M9 145 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 ZNF702PQ9H963 129 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 LINC00527Q9UJ94 153 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 MRPS16Q9Y3D3 137 aaKnown RBP4.2□□□□□ -1.74
PCF11-205ENST00000530906 PAM16Q9Y3D7 125 aa4.2□□□□□ -1.74
PCF11-205ENST00000530906 UBR5O95071 2799 aaPredicted RBP4.19□□□□□ -1.74
PCF11-205ENST00000530906 IGHV3OR16-13A0A075B7E8 117 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 IGHV3-49A0A0A0MS15 119 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 IGHV3-74A0A0B4J1X5 117 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 IGKV3D-20A0A0C4DH25 116 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 IGHV3-66A0A0C4DH42 116 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 A1L4Q6 167 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 TMEM213A2RRL7 107 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 OR4C46A6NHA9 309 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 KLLNB2CW77 178 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 M0R381 172 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 NXPH4O95158 308 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 G0S2P27469 103 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 TM4SF20Q53R12 229 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 SPANXN1Q5VSR9 72 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 ZNF705AQ6ZN79 300 aaPredicted RBP4.19□□□□□ -1.74
PCF11-205ENST00000530906 Q71RC1 249 aaPredicted RBP4.19□□□□□ -1.74
PCF11-205ENST00000530906 AMN1Q8IY45 258 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 DCANP1Q8TF63 244 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 NRGNQ92686 78 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 PMCHL2Q9BQD1 86 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 SCRT2Q9NQ03 307 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 SIGLEC8Q9NYZ4 499 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 CR1P17927 2039 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 ANKRD17O75179 2603 aaKnown RBP4.19□□□□□ -1.74
PCF11-205ENST00000530906 ZNF462Q96JM2 2506 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 SPG11Q96JI7 2443 aa4.19□□□□□ -1.74
PCF11-205ENST00000530906 K7EQG2 157 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 TNFRSF6BO95407 300 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 S100A4P26447 101 aaKnown RBP4.18□□□□□ -1.74
PCF11-205ENST00000530906 FCER1GP30273 86 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 SSTP61278 116 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 RPL32P62910 135 aaKnown RBP4.18□□□□□ -1.74
PCF11-205ENST00000530906 LGALS9BQ3B8N2 356 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 TDRG1Q3Y452 100 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 LGALS9CQ6DKI2 356 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 Q8N8P6 123 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 OR1N2Q8NGR9 330 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 RNF185Q96GF1 192 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 Q96MF0 132 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 AP1S3Q96PC3 154 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 C20orf78Q9BR46 151 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 PEMTQ9UBM1 199 aa4.18□□□□□ -1.74
PCF11-205ENST00000530906 SMG1Q96Q15 3661 aaKnown RBP4.17□□□□□ -1.74
PCF11-205ENST00000530906 A0A0J9YX75 114 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 A8MTW9 85 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 HOXA3O43365 443 aaPredicted RBP4.17□□□□□ -1.74
PCF11-205ENST00000530906 ATP5LO75964 103 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 NPYP01303 97 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 CSN3P07498 182 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 IFI27P40305 119 aaPredicted RBP4.17□□□□□ -1.74
PCF11-205ENST00000530906 HNRNPA3P51991 378 aaKnown RBP4.17□□□□□ -1.74
PCF11-205ENST00000530906 FOXI2Q6ZQN5 318 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 POM121L12Q8N7R1 296 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 OR2K2Q8NGT1 345 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 C4orf3Q8WVX3 66 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 FOXC2Q99958 501 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 DPH3P1Q9H4G8 78 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 PHLDA3Q9Y5J5 127 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 FAM208BQ5VWN6 2430 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 CREBBPQ92793 2442 aa4.17□□□□□ -1.74
PCF11-205ENST00000530906 FLNCQ14315 2725 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms