RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ASIPP42127 132 aa13.02□□□□□ -0.33
BRCA2-204ENST00000530893 TM4SF20Q53R12 229 aa13.02□□□□□ -0.33
BRCA2-204ENST00000530893 Q6ZQT7 251 aa13.02□□□□□ -0.33
BRCA2-204ENST00000530893 C2orf91Q6ZV80 131 aa13.02□□□□□ -0.33
BRCA2-204ENST00000530893 BOD1L2Q8IYS8 172 aa13.02□□□□□ -0.33
BRCA2-204ENST00000530893 SIVA1O15304 175 aa13.01□□□□□ -0.33
BRCA2-204ENST00000530893 ATP5LO75964 103 aa13.01□□□□□ -0.33
BRCA2-204ENST00000530893 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.01□□□□□ -0.336e-7■■■■□ 26.6
BRCA2-204ENST00000530893 S100A4P26447 101 aaKnown RBP13.01□□□□□ -0.33
BRCA2-204ENST00000530893 ID1P41134 155 aa13.01□□□□□ -0.33
BRCA2-204ENST00000530893 LAGE3Q14657 143 aa13.01□□□□□ -0.33
BRCA2-204ENST00000530893 OR9G4Q8NGQ1 327 aa13.01□□□□□ -0.33
BRCA2-204ENST00000530893 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
BRCA2-204ENST00000530893 ZMAT4Q9H898 229 aa13.01□□□□□ -0.33
BRCA2-204ENST00000530893 C18orf15Q96N68 181 aa13□□□□□ -0.33
BRCA2-204ENST00000530893 K7EMI3 77 aa13□□□□□ -0.33
BRCA2-204ENST00000530893 SRSF1Q07955 248 aaKnown RBP eCLIP13□□□□□ -0.33
BRCA2-204ENST00000530893 ODF1Q14990 250 aa13□□□□□ -0.33
BRCA2-204ENST00000530893 DEFB112Q30KQ8 113 aa13□□□□□ -0.33
BRCA2-204ENST00000530893 LCNL1Q6ZST4 164 aa13□□□□□ -0.33
BRCA2-204ENST00000530893 A0A096LNT2 108 aa12.99□□□□□ -0.33
BRCA2-204ENST00000530893 CD5LO43866 347 aa12.99□□□□□ -0.33
BRCA2-204ENST00000530893 IGHV4-59P01825 116 aa12.99□□□□□ -0.33
BRCA2-204ENST00000530893 UBE2V1Q13404 147 aa12.99□□□□□ -0.33
BRCA2-204ENST00000530893 DPH3P1Q9H4G8 78 aa12.99□□□□□ -0.33
BRCA2-204ENST00000530893 PHLDA3Q9Y5J5 127 aa12.99□□□□□ -0.33
BRCA2-204ENST00000530893 IGSF10Q6WRI0 2623 aa12.99□□□□□ -0.33
BRCA2-204ENST00000530893 PRSS1P07477 247 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 SMIM17P0DL12 118 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 SEC11AP67812 179 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 ANXA2RQ3ZCQ2 193 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 DKK2Q9UBU2 259 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 CELSR1Q9NYQ6 3014 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 TRAV26-2A0A0B4J265 109 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 J3KRW8 73 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 RNASE4P34096 147 aaKnown RBP12.98□□□□□ -0.33
BRCA2-204ENST00000530893 PTTG1IPP53801 180 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 MYOZ3Q8TDC0 251 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 C20orf78Q9BR46 151 aa12.98□□□□□ -0.33
BRCA2-204ENST00000530893 KLLNB2CW77 178 aa12.97□□□□□ -0.33
BRCA2-204ENST00000530893 M0R381 172 aa12.97□□□□□ -0.33
BRCA2-204ENST00000530893 TAX1BP3O14907 124 aa12.97□□□□□ -0.33
BRCA2-204ENST00000530893 TMEM97Q5BJF2 176 aa12.97□□□□□ -0.33
BRCA2-204ENST00000530893 WFDC3Q8IUB2 231 aa12.97□□□□□ -0.33
BRCA2-204ENST00000530893 DCANP1Q8TF63 244 aa12.97□□□□□ -0.33
BRCA2-204ENST00000530893 SMIM2Q9BVW6 85 aa12.97□□□□□ -0.33
BRCA2-204ENST00000530893 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
BRCA2-204ENST00000530893 F6UB75 175 aa12.96□□□□□ -0.33
BRCA2-204ENST00000530893 PPP1R17O96001 155 aa12.96□□□□□ -0.33
BRCA2-204ENST00000530893 NRGNQ92686 78 aa12.96□□□□□ -0.33
BRCA2-204ENST00000530893 SPG11Q96JI7 2443 aa12.96□□□□□ -0.33
BRCA2-204ENST00000530893 USP9XQ93008 2570 aaPredicted RBP12.96□□□□□ -0.33
BRCA2-204ENST00000530893 A1L4Q6 167 aa12.96□□□□□ -0.34
BRCA2-204ENST00000530893 IGKCP01834 107 aa12.96□□□□□ -0.34
BRCA2-204ENST00000530893 COX6B1P14854 86 aa12.96□□□□□ -0.34
BRCA2-204ENST00000530893 FLNCQ14315 2725 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 IGKV3-7A0A075B6H7 116 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 DEFB1P60022 68 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 TMEM95Q3KNT9 176 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 ORMDL2Q53FV1 153 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 Q6ZVH6 145 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 AP1S3Q96PC3 154 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 ODF3Q96PU9 254 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 HHLA3Q9XRX5 114 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 DPM2O94777 84 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 NXPH4O95158 308 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 TGFAP01135 160 aa12.95□□□□□ -0.34
BRCA2-204ENST00000530893 SUMO2P61956 95 aaKnown RBP12.95□□□□□ -0.34
BRCA2-204ENST00000530893 CCL25O15444 150 aa12.94□□□□□ -0.34
BRCA2-204ENST00000530893 RNASE3P12724 160 aaKnown RBP12.94□□□□□ -0.34
BRCA2-204ENST00000530893 FOSL1P15407 271 aa12.94□□□□□ -0.34
BRCA2-204ENST00000530893 HSD52Q0P140 79 aa12.94□□□□□ -0.34
BRCA2-204ENST00000530893 POM121L12Q8N7R1 296 aa12.94□□□□□ -0.34
BRCA2-204ENST00000530893 FOXC2Q99958 501 aa12.94□□□□□ -0.34
BRCA2-204ENST00000530893 NMUP48645 174 aa12.93□□□□□ -0.34
BRCA2-204ENST00000530893 VPREB3Q9UKI3 123 aa12.93□□□□□ -0.34
BRCA2-204ENST00000530893 HLA-DRB4P13762 266 aa12.93□□□□□ -0.34
BRCA2-204ENST00000530893 FAM159AQ6UWV7 190 aa12.93□□□□□ -0.34
BRCA2-204ENST00000530893 RASL10AQ92737 203 aa12.93□□□□□ -0.34
BRCA2-204ENST00000530893 HLA-DRB4X5D2U9 266 aa12.93□□□□□ -0.34
BRCA2-204ENST00000530893 FSHBP01225 129 aa12.92□□□□□ -0.34
BRCA2-204ENST00000530893 ELANEP08246 267 aa12.92□□□□□ -0.34
BRCA2-204ENST00000530893 VAMP3Q15836 100 aa12.92□□□□□ -0.34
BRCA2-204ENST00000530893 C14orf178Q8N769 122 aaPredicted RBP12.92□□□□□ -0.34
BRCA2-204ENST00000530893 A6NDN8 102 aa12.91□□□□□ -0.34
BRCA2-204ENST00000530893 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.91□□□□□ -0.34
BRCA2-204ENST00000530893 LGALS9O00182 355 aa12.91□□□□□ -0.34
BRCA2-204ENST00000530893 GNRH2O43555 120 aa12.91□□□□□ -0.34
BRCA2-204ENST00000530893 SRD5A1P18405 259 aa12.91□□□□□ -0.34
BRCA2-204ENST00000530893 A0A087WX48 190 aa12.91□□□□□ -0.34
BRCA2-204ENST00000530893 TRAV12-1A0A0B4J245 112 aa12.91□□□□□ -0.34
BRCA2-204ENST00000530893 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
BRCA2-204ENST00000530893 ADAMTSL5Q6ZMM2 481 aa12.91□□□□□ -0.34
BRCA2-204ENST00000530893 EPG5Q9HCE0 2579 aa12.91□□□□□ -0.34
BRCA2-204ENST00000530893 LGALS1P09382 135 aaKnown RBP12.9□□□□□ -0.34
BRCA2-204ENST00000530893 PLNP26678 52 aa12.9□□□□□ -0.34
BRCA2-204ENST00000530893 Q6YL49 198 aa12.9□□□□□ -0.34
BRCA2-204ENST00000530893 PCP2Q8IVA1 136 aa12.9□□□□□ -0.34
BRCA2-204ENST00000530893 TOMM6Q96B49 74 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms