RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 CREBBPQ92793 2442 aa-0.28□□□□□ -2.45
NUP98-218ENST00000530516 TECPR2O15040 1411 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 YTHDC2Q9H6S0 1430 aaKnown RBP-0.29□□□□□ -2.46
NUP98-218ENST00000530516 VIRMAQ69YN4 1812 aaKnown RBP-0.29□□□□□ -2.46
NUP98-218ENST00000530516 LOC101927531A0A1B0GV80 90 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 TMEM210A6NLX4 147 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 CSN2P05814 226 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 ETV6P41212 452 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 POU6F1Q14863 301 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 TMEM229BQ8NBD8 167 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 OR8J3Q8NGG0 315 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 DGCR14Q96DF8 476 aaKnown RBP-0.29□□□□□ -2.46
NUP98-218ENST00000530516 BORCS8Q96FH0 119 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 DMAC1Q96GE9 116 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 IL20Q9NYY1 176 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 MRPL36Q9P0J6 103 aaKnown RBP-0.29□□□□□ -2.46
NUP98-218ENST00000530516 SS18L2Q9UHA2 77 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 WDR97A6NE52 1622 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 HECTD1Q9ULT8 2610 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 STAB2Q8WWQ8 2551 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 CHD9Q3L8U1 2897 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 CACNA1AO00555 2505 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 PRKDCP78527 4128 aaKnown RBP-0.29□□□□□ -2.46
NUP98-218ENST00000530516 FAM208BQ5VWN6 2430 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 KIDINS220Q9ULH0 1771 aa-0.29□□□□□ -2.46
NUP98-218ENST00000530516 LOC107986453A0A1B0GWG9 222 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 TMEM30CPA0ZSE6 113 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 TPST1O60507 370 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 TPT1P13693 172 aaKnown RBP-0.3□□□□□ -2.46
NUP98-218ENST00000530516 GLRXP35754 106 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 MAXP61244 160 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 ARF6P62330 175 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 OR5H6Q8NGV6 325 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 DSCR8Q96T75 97 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 PRR15LQ9BU68 103 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 TAF9BQ9HBM6 251 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 BIN3Q9NQY0 253 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 MPC1Q9Y5U8 109 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 CMYA5Q8N3K9 4069 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 PKD1P98161 4303 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 WDR87Q6ZQQ6 2873 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 VWFP04275 2813 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 COL12A1Q99715 3063 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 NBEAL2Q6ZNJ1 2754 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 SOGA1O94964 1423 aa-0.3□□□□□ -2.46
NUP98-218ENST00000530516 LAMA2P24043 3122 aaKnown RBP-0.31□□□□□ -2.46
NUP98-218ENST00000530516 EIF3AQ14152 1382 aaKnown RBP-0.31□□□□□ -2.46
NUP98-218ENST00000530516 PARP14Q460N5 1801 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 SYNMO15061 1565 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 DYNC1H1Q14204 4646 aaKnown RBP-0.31□□□□□ -2.46
NUP98-218ENST00000530516 VPS13DQ5THJ4 4388 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 ITPR3Q14573 2671 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 NBEAL1Q6ZS30 2694 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 TRDV1A0A1B0GX56 115 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 IFITM5A6NNB3 132 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 C10orf142B7Z368 130 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 MFSD11O43934 449 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 S100A6P06703 90 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 MPC1LP0DKB6 136 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 BCL2P10415 239 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 FABP2P12104 132 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 GNG3P63215 75 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 RPL19P84098 196 aaKnown RBP-0.31□□□□□ -2.46
NUP98-218ENST00000530516 COX6A2Q02221 97 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 IDO2Q6ZQW0 420 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 AP3S1Q92572 193 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 CHMP6Q96FZ7 201 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 PRELID3AQ96N28 172 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 LRTM1Q9HBL6 345 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 OTORQ9NRC9 128 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 NUBP2Q9Y5Y2 271 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 ACANP16112 2415 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 EP300Q09472 2414 aaPredicted RBP-0.31□□□□□ -2.46
NUP98-218ENST00000530516 DSPP15924 2871 aaKnown RBP-0.31□□□□□ -2.46
NUP98-218ENST00000530516 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.31□□□□□ -2.46
NUP98-218ENST00000530516 AKAP11Q9UKA4 1901 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 USP9YO00507 2555 aaPredicted RBP-0.31□□□□□ -2.46
NUP98-218ENST00000530516 EPG5Q9HCE0 2579 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 LRP5O75197 1615 aa-0.31□□□□□ -2.46
NUP98-218ENST00000530516 COL6A5A8TX70 2615 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 MYH9P35579 1960 aaKnown RBP-0.32□□□□□ -2.46
NUP98-218ENST00000530516 CDK13Q14004 1512 aaKnown RBP-0.32□□□□□ -2.46
NUP98-218ENST00000530516 A0A0G2JMM0 328 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 EDF1O60869 148 aaKnown RBP-0.32□□□□□ -2.46
NUP98-218ENST00000530516 SDC4P31431 198 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 SDC2P34741 201 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 SRP9P49458 86 aaKnown RBP-0.32□□□□□ -2.46
NUP98-218ENST00000530516 TCTAP57738 103 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 LTC4SQ16873 150 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 LYPD5Q6UWN5 251 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 TMED4Q7Z7H5 227 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 MNS1Q8NEH6 495 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 KIF13AQ9H1H9 1805 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 DCHS2Q6V1P9 2916 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 DNAH1Q9P2D7 4330 aa-0.32□□□□□ -2.46
NUP98-218ENST00000530516 TMEM189A5PLL7 270 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 F2Z2F3 143 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 GABARAPH6UMI1 98 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 PGRMC1O00264 195 aaKnown RBP-0.33□□□□□ -2.46
NUP98-218ENST00000530516 RHOHQ15669 191 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms