RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 SLC25A6P12236 298 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 HIST1H1DP16402 221 aaKnown RBP2.13□□□□□ -2.07
CASP4-208ENST00000530309 CCL1P22362 96 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 ZNF93P35789 620 aaPredicted RBP2.13□□□□□ -2.07
CASP4-208ENST00000530309 CRYBA4P53673 196 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 RBM11P57052 281 aaKnown RBP2.13□□□□□ -2.07
CASP4-208ENST00000530309 TBPL1P62380 186 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 SRSF6Q13247 344 aaKnown RBP2.13□□□□□ -2.07
CASP4-208ENST00000530309 MSMO1Q15800 293 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 NMSQ5H8A3 153 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 Q6ZS52 159 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 SPATA12Q7Z6I5 190 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 TRAPPC6BQ86SZ2 158 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 C5orf17Q8NAS9 161 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 OR8B3Q8NGG8 313 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 FAM213BQ8TBF2 198 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 TSPAN32Q96QS1 320 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 NMNAT3Q96T66 252 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 SIGMAR1Q99720 223 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 HSPB9Q9BQS6 159 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 VPS25Q9BRG1 176 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 VAMP8Q9BV40 100 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 MANBALQ9NQG1 85 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 JPT1Q9UK76 154 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 MED31Q9Y3C7 131 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 IER3IP1Q9Y5U9 82 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 PLXNA3P51805 1871 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 PTPRDP23468 1912 aa2.13□□□□□ -2.07
CASP4-208ENST00000530309 SCN8AQ9UQD0 1980 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 COL4A6Q14031 1691 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 NUP210LQ5VU65 1888 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 TRBV20OR9-2A0A075B6H5 130 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 F2Z2F3 143 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 TRAPPC2LH3BP13 241 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 J3QQQ9 107 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 IFNA1P01562 189 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 C3orf79P0CE67 100 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 FGF6P10767 208 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 HIST1H1TP22492 207 aaPredicted RBP2.12□□□□□ -2.07
CASP4-208ENST00000530309 S100A7P31151 101 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 RPL27AP46776 148 aaKnown RBP2.12□□□□□ -2.07
CASP4-208ENST00000530309 GABRA2P47869 451 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 TPPP2P59282 170 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 SERF2P84101 59 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 LGALS9BQ3B8N2 356 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 SPATA45Q537H7 98 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 MRPL54Q6P161 138 aaKnown RBP2.12□□□□□ -2.07
CASP4-208ENST00000530309 RPP25LQ8N5L8 163 aaKnown RBP2.12□□□□□ -2.07
CASP4-208ENST00000530309 C18orf32Q8TCD1 76 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 SMCR5Q8TEV8 140 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 PSMF1Q92530 271 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 RNASE6Q93091 150 aaKnown RBP2.12□□□□□ -2.07
CASP4-208ENST00000530309 AIF1LQ9BQI0 150 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 COMMD5Q9GZQ3 224 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 TMEM222Q9H0R3 208 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 BANF2Q9H503 90 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 NAA60Q9H7X0 242 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 ST20Q9HBF5 79 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 NPVFQ9HCQ7 196 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 TAS2R4Q9NYW5 299 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 CKLFQ9UBR5 152 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 AK3Q9UIJ7 227 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 HS3ST2Q9Y278 367 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 RBM7Q9Y580 266 aaKnown RBP2.12□□□□□ -2.07
CASP4-208ENST00000530309 TIMM9Q9Y5J7 89 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 LY96Q9Y6Y9 160 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 NINQ8N4C6 2090 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 PLXNB2O15031 1838 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 OTOGLQ3ZCN5 2332 aa2.12□□□□□ -2.07
CASP4-208ENST00000530309 TRPM7Q96QT4 1865 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 TNS1Q9HBL0 1735 aaKnown RBP2.11□□□□□ -2.07
CASP4-208ENST00000530309 ANAPC1Q9H1A4 1944 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 TRGV5A0A0B4J1U4 118 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 A0A1B0GV72 72 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 ODAMA1E959 279 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 DPRXA6NFQ7 191 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 FAM24AA6NFZ4 105 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 OR2T8A6NH00 312 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 ARL5CA6NH57 179 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 ZNF705FA8MVS1 300 aaPredicted RBP2.11□□□□□ -2.07
CASP4-208ENST00000530309 H3BRM9 83 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 K7EP34 96 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 NPYP01303 97 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 ZNF705DP0CH99 300 aaPredicted RBP2.11□□□□□ -2.07
CASP4-208ENST00000530309 ZNF705BP0CI00 300 aaPredicted RBP2.11□□□□□ -2.07
CASP4-208ENST00000530309 CMPK1P30085 196 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 SEC11AP67812 179 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 HSD52Q0P140 79 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 PMCHL1Q16048 86 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 LRRC75BQ2VPJ9 315 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 SAMD13Q5VXD3 122 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 Q6ZS92 163 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 Q6ZTI0 123 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 SLC22A24Q8N4F4 322 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 TCTEX1D1Q8N7M0 179 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 OR52R1Q8NGF1 315 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 WFDC5Q8TCV5 224 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 RNF133Q8WVZ7 376 aa2.11□□□□□ -2.07
CASP4-208ENST00000530309 ADAT3Q96EY9 351 aaPredicted RBP2.11□□□□□ -2.07
CASP4-208ENST00000530309 SFRP2Q96HF1 295 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms