RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 OR2F1Q13607 317 aa4.02□□□□□ -1.77
SVIP-204ENST00000530199 PSG3Q16557 428 aa4.02□□□□□ -1.77
SVIP-204ENST00000530199 PCP2Q8IVA1 136 aa4.02□□□□□ -1.77
SVIP-204ENST00000530199 C9orf163Q8N9P6 203 aa4.02□□□□□ -1.77
SVIP-204ENST00000530199 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 H7C1H1 209 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 SPINK4O60575 86 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 DTYMKP23919 212 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 SUPT4H1P63272 117 aaKnown RBP4.01□□□□□ -1.77
SVIP-204ENST00000530199 SPCS2Q15005 226 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 SDIM1Q6ZPB5 146 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 MRPL55Q7Z7F7 128 aaKnown RBP4.01□□□□□ -1.77
SVIP-204ENST00000530199 DEFB107AQ8IZN7 70 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 ZNF664Q8N3J9 261 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 INO80EQ8NBZ0 244 aaPredicted RBP4.01□□□□□ -1.77
SVIP-204ENST00000530199 GABARAPL1Q9H0R8 117 aa4.01□□□□□ -1.77
SVIP-204ENST00000530199 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
SVIP-204ENST00000530199 TRGV1A0A0A0MS02 117 aa4□□□□□ -1.77
SVIP-204ENST00000530199 A6NDN8 102 aa4□□□□□ -1.77
SVIP-204ENST00000530199 GABARAPO95166 117 aa4□□□□□ -1.77
SVIP-204ENST00000530199 KRASP01116 189 aa4□□□□□ -1.77
SVIP-204ENST00000530199 IGHV3-30P01768 117 aa4□□□□□ -1.77
SVIP-204ENST00000530199 IGHV3-33P01772 117 aa4□□□□□ -1.77
SVIP-204ENST00000530199 IGHV3-30-3P0DP02 117 aa4□□□□□ -1.77
SVIP-204ENST00000530199 IGHV3-30-5P0DP03 117 aa4□□□□□ -1.77
SVIP-204ENST00000530199 RAB4AP20338 218 aa4□□□□□ -1.77
SVIP-204ENST00000530199 SNCAP37840 140 aa4□□□□□ -1.77
SVIP-204ENST00000530199 OPRK1P41145 380 aa4□□□□□ -1.77
SVIP-204ENST00000530199 ARPC4P59998 168 aa4□□□□□ -1.77
SVIP-204ENST00000530199 HSPE1P61604 102 aaKnown RBP4□□□□□ -1.77
SVIP-204ENST00000530199 CNBPP62633 177 aaKnown RBP4□□□□□ -1.77
SVIP-204ENST00000530199 C11orf72Q8NBR9 251 aa4□□□□□ -1.77
SVIP-204ENST00000530199 LRRC20Q8TCA0 184 aa4□□□□□ -1.77
SVIP-204ENST00000530199 MRGPRFQ96AM1 343 aa4□□□□□ -1.77
SVIP-204ENST00000530199 CIB1Q99828 191 aa4□□□□□ -1.77
SVIP-204ENST00000530199 SLC25A31Q9H0C2 315 aa4□□□□□ -1.77
SVIP-204ENST00000530199 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
SVIP-204ENST00000530199 TRAV6A0A075B6T7 132 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 A0A096LNJ9 63 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 IGHV3-53P01767 116 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 RD3LP0DJH9 198 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 RNASE2P10153 161 aaKnown RBP3.99□□□□□ -1.77
SVIP-204ENST00000530199 HIST1H1DP16402 221 aaKnown RBP3.99□□□□□ -1.77
SVIP-204ENST00000530199 OR10J1P30954 320 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 G6PCP35575 357 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 RHOBP62745 196 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 DPPA3Q6W0C5 159 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 TMPRSS11AQ6ZMR5 421 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 KRTAP11-1Q8IUC1 163 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 ZNF680Q8NEM1 530 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 BPIFB6Q8NFQ5 453 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 OR8A1Q8NGG7 326 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 OR51H1Q8NH63 302 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 RMI2Q96E14 147 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 ZC2HC1AQ96GY0 325 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
SVIP-204ENST00000530199 USH2AO75445 5202 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 G3V2T6 193 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 PITX3O75364 302 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 SLC25A4P12235 298 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 TALDO1P37837 337 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 ERCC8Q13216 396 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 BSXQ3C1V8 233 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 HSD17B12Q53GQ0 312 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 AADACL3Q5VUY0 350 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 PRSS54Q6PEW0 395 aa3.98□□□□□ -1.77
SVIP-204ENST00000530199 TRAV8-2A0A0B4J237 113 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 TRGV4A0A0C4DH28 118 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 S100A5P33763 92 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 LPAR6P43657 344 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 TCL1AP56279 114 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 RPL19P84098 196 aaKnown RBP3.97□□□□□ -1.77
SVIP-204ENST00000530199 HIST1H1AQ02539 215 aaPredicted RBP3.97□□□□□ -1.77
SVIP-204ENST00000530199 OR10J3Q5JRS4 329 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 ZNF818PQ6ZRF7 136 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 OR8I2Q8N0Y5 310 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 C15orf56Q8N910 161 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 RPP21Q9H633 154 aaKnown RBP3.97□□□□□ -1.77
SVIP-204ENST00000530199 MTFP1Q9UDX5 166 aa3.97□□□□□ -1.77
SVIP-204ENST00000530199 GGTLC3B5MD39 225 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 HSBP1O75506 76 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 PPYP01298 95 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 GADD45AP24522 165 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 GALR1P47211 349 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 FLOT2Q14254 428 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 IDNKQ5T6J7 187 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 HACD4Q5VWC8 232 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 ARRDC1Q8N5I2 433 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 SPACA4Q8TDM5 124 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 BORCS5Q969J3 196 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 ANXA10Q9UJ72 324 aa3.96□□□□□ -1.78
SVIP-204ENST00000530199 A0A1B0GVX0 72 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 RANBP1P43487 201 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 OR10A3P58181 314 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 ZNF266Q14584 549 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 GCSAMLQ5JQS6 135 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 DAZ4Q86SG3 579 aaKnown RBP3.95□□□□□ -1.78
SVIP-204ENST00000530199 RNF182Q8N6D2 247 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms