RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SLC25A34Q6PIV7 304 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 PATE2Q6UY27 113 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 PP632Q6XCG6 107 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 SSX8Q7RTT4 187 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 ATOH7Q8N100 152 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 Q8N9L7 120 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 FAM104AQ969W3 186 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 PTH2Q96A98 100 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 NDFIP1Q9BT67 221 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 SLC25A2Q9BXI2 301 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 TMEM191AQ9H0A3 160 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 KLF13Q9Y2Y9 288 aaPredicted RBP2.91□□□□□ -1.94
USP47-209ENST00000530041 AMMECR1Q9Y4X0 333 aaPredicted RBP2.91□□□□□ -1.94
USP47-209ENST00000530041 MYO9BQ13459 2157 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 CENPFP49454 3210 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 COL27A1Q8IZC6 1860 aaPredicted RBP2.9□□□□□ -1.94
USP47-209ENST00000530041 IGKV1D-37A0A075B6S9 117 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 TRAV5A0A0B4J249 113 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 TRAV8-6A0A0B4J262 113 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 IGHV1-24A0A0C4DH33 117 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 TEX50A0A1B0GTY4 177 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 A8MWL6 223 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 H3BRM9 83 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 CORTO00230 105 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 LHBP01229 141 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 NBEAP1P0C6P0 100 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 COX8AP10176 69 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 ARF6P62330 175 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 SEC11AP67812 179 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 UBE2L3P68036 154 aaKnown RBP2.9□□□□□ -1.95
USP47-209ENST00000530041 HBBP68871 147 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 PSG9Q00887 426 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 AMMECR1LQ6DCA0 310 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 C2orf91Q6ZV80 131 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 BLNKQ8WV28 456 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 H1FXQ92522 213 aaKnown RBP2.9□□□□□ -1.95
USP47-209ENST00000530041 FXYD5Q96DB9 178 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 GPR82Q96P67 336 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 METTL26Q96S19 204 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 RPP21Q9H633 154 aaKnown RBP2.9□□□□□ -1.95
USP47-209ENST00000530041 NDUFA4L2Q9NRX3 87 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 ZNF355PQ9NSJ1 428 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 EPDR1Q9UM22 224 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 UTRNP46939 3433 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 DOCK10Q96BY6 2186 aa2.9□□□□□ -1.95
USP47-209ENST00000530041 DIDO1Q9BTC0 2240 aaKnown RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 PI4KAP42356 2102 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 LOC102724200A0A096LPH7 203 aaPredicted RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 TRGV5A0A0B4J1U4 118 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 IGHV1-69DA0A0B4J2H0 117 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 MUC21A0A0G2JKD1 596 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 IGHV3-64DA0A0J9YX35 117 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 MUC21A0A140T8X8 626 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 TCRBV4S1A1TA0A5B7 111 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 OR2T8A6NH00 312 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 HIGD1CA8MV81 97 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 K7ERU9 68 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 LEPROTL1O95214 131 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 LTAP01374 205 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 CECR9P0C854 216 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 SAA2P0DJI9 122 aaPredicted RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 FGF6P10767 208 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 CACNA1DQ01668 2161 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 EDDM3AQ14507 147 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 LTC4SQ16873 150 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 LDLRAD2Q5SZI1 272 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 C10orf113Q5VZT2 155 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 LINC00322Q6ZN03 302 aaPredicted RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 ZCCHC24Q8N2G6 241 aaKnown RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 FER1L6-AS1Q8NA97 138 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 OR4A5Q8NH83 315 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 TMEM167AQ8TBQ9 72 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 PIFOQ8TCI5 191 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 FMC1Q96HJ9 113 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 VPS25Q9BRG1 176 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 ZNF430Q9H8G1 570 aaPredicted RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 SPANXB1Q9NS25 103 aaPredicted RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 RPUSD1Q9UJJ7 312 aaKnown RBP2.89□□□□□ -1.95
USP47-209ENST00000530041 HSPB8Q9UJY1 196 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 PSG8Q9UQ74 426 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 WASHC3Q9Y3C0 194 aa2.89□□□□□ -1.95
USP47-209ENST00000530041 BRWD1Q9NSI6 2320 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 IGHV1-18A0A0C4DH31 117 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 TINCRA0A1B0GVN0 87 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 PGPA6NDG6 321 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 TMEM238C9JI98 176 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 COX7A2P2O60397 106 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 LYZL6O75951 148 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 MOSP00540 346 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 SLC25A5P05141 298 aaKnown RBP2.88□□□□□ -1.95
USP47-209ENST00000530041 SAA1P0DJI8 122 aaPredicted RBP2.88□□□□□ -1.95
USP47-209ENST00000530041 SMIM17P0DL12 118 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 PYYP10082 97 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 HERVK_113P61574 105 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 ERHP84090 104 aaKnown RBP2.88□□□□□ -1.95
USP47-209ENST00000530041 LGALS9BQ3B8N2 356 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 TMEM97Q5BJF2 176 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 PSMG4Q5JS54 123 aa2.88□□□□□ -1.95
USP47-209ENST00000530041 LGALS9CQ6DKI2 356 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms