RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ZNF80P51504 273 aaPredicted RBP8.92□□□□□ -0.98
CCDC90B-216ENST00000529856 ZNF415Q09FC8 603 aa8.92□□□□□ -0.98
CCDC90B-216ENST00000529856 TMEM183BQ1AE95 376 aa8.92□□□□□ -0.98
CCDC90B-216ENST00000529856 SMUG1Q53HV7 270 aa8.92□□□□□ -0.98
CCDC90B-216ENST00000529856 TMEM88Q6PEY1 159 aa8.92□□□□□ -0.98
CCDC90B-216ENST00000529856 TMEM183AQ8IXX5 376 aa8.92□□□□□ -0.98
CCDC90B-216ENST00000529856 MDFICQ9P1T7 246 aa8.92□□□□□ -0.98
CCDC90B-216ENST00000529856 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 GNRH2O43555 120 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 GCGP01275 180 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 CCL20P78556 96 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 LGALS9BQ3B8N2 356 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 C18orf15Q96N68 181 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 NAGKQ9UJ70 344 aa8.91□□□□□ -0.98
CCDC90B-216ENST00000529856 TRGV2A0A075B6R0 118 aa8.9□□□□□ -0.98
CCDC90B-216ENST00000529856 TRBV6-1A0A0K0K1D8 114 aa8.9□□□□□ -0.98
CCDC90B-216ENST00000529856 PFN1P07737 140 aaKnown RBP8.9□□□□□ -0.98
CCDC90B-216ENST00000529856 Q86TA4 180 aa8.9□□□□□ -0.98
CCDC90B-216ENST00000529856 KCNS1Q96KK3 526 aa8.9□□□□□ -0.98
CCDC90B-216ENST00000529856 SPXQ9BT56 116 aa8.9□□□□□ -0.98
CCDC90B-216ENST00000529856 ZFP30Q9Y2G7 519 aa8.9□□□□□ -0.98
CCDC90B-216ENST00000529856 IGHV3-16A0A0C4DH30 117 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 TYMSP04818 313 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 P0DMU3 169 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 FAM231AP0DMU4 169 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 FAM231CP0DMU5 169 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 HOXA5P20719 270 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 C15orf53Q8NAA6 179 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 FMC1Q96HJ9 113 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 SDF2L1Q9HCN8 221 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 MRPL16Q9NX20 251 aaKnown RBP8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 C11orf21Q9P2W6 132 aa8.89□□□□□ -0.99
CCDC90B-216ENST00000529856 FABP5P3A8MUU1 101 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 TEX46H3BTG2 121 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 AKR1C3P42330 323 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 UBE2G1P62253 170 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 OR5I1Q13606 314 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 COX8CQ7Z4L0 72 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 RASL10AQ92737 203 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 MANBALQ9NQG1 85 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 GNG13Q9P2W3 67 aa8.88□□□□□ -0.99
CCDC90B-216ENST00000529856 LTAP01374 205 aa8.87□□□□□ -0.99
CCDC90B-216ENST00000529856 S100A9P06702 114 aaKnown RBP8.87□□□□□ -0.99
CCDC90B-216ENST00000529856 NKX2-5P52952 324 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-216ENST00000529856 POM121L12Q8N7R1 296 aa8.87□□□□□ -0.99
CCDC90B-216ENST00000529856 KMT2AQ03164 3969 aa8.87□□□□□ -0.99
CCDC90B-216ENST00000529856 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
CCDC90B-216ENST00000529856 SCO2A0A1W2PP80 73 aa8.86□□□□□ -0.99
CCDC90B-216ENST00000529856 M0R2P5 195 aa8.86□□□□□ -0.99
CCDC90B-216ENST00000529856 NUDT3O95989 172 aa8.86□□□□□ -0.99
CCDC90B-216ENST00000529856 CRIP1P50238 77 aa8.86□□□□□ -0.99
CCDC90B-216ENST00000529856 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
CCDC90B-216ENST00000529856 MUC4Q99102 2169 aa8.86□□□□□ -0.99
CCDC90B-216ENST00000529856 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
CCDC90B-216ENST00000529856 A0A0J9YY99 117 aa8.85□□□□□ -0.99
CCDC90B-216ENST00000529856 H3BNG1 76 aa8.85□□□□□ -0.99
CCDC90B-216ENST00000529856 RNF212Q495C1 297 aa8.85□□□□□ -0.99
CCDC90B-216ENST00000529856 TXNDC17Q9BRA2 123 aa8.85□□□□□ -0.99
CCDC90B-216ENST00000529856 IGHV3-53P01767 116 aa8.84□□□□□ -0.99
CCDC90B-216ENST00000529856 ZNF674Q2M3X9 581 aa8.84□□□□□ -0.99
CCDC90B-216ENST00000529856 FAM162BQ5T6X4 162 aa8.84□□□□□ -0.99
CCDC90B-216ENST00000529856 ALKAL2Q6UX46 152 aa8.84□□□□□ -0.99
CCDC90B-216ENST00000529856 C11orf52Q96A22 123 aa8.84□□□□□ -0.99
CCDC90B-216ENST00000529856 C9orf85Q96MD7 179 aa8.84□□□□□ -0.99
CCDC90B-216ENST00000529856 DNAH6Q9C0G6 4158 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 SH2D1AO60880 128 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 IFNA1P01562 189 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 ORM1P02763 201 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
CCDC90B-216ENST00000529856 BLOC1S1P78537 153 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 SLAQ13239 276 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 FHL2Q14192 279 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 BAGE2Q86Y30 109 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 UBE2DNLQ8IWF7 75 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 PTH2Q96A98 100 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 VSIG2Q96IQ7 327 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 MLST8Q9BVC4 326 aa8.83□□□□□ -1
CCDC90B-216ENST00000529856 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 B4DEV8 164 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 KRBOX1C9JBD0 128 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 SFTA3P0C7M3 94 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 RPL35P42766 123 aaKnown RBP8.82□□□□□ -1
CCDC90B-216ENST00000529856 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
CCDC90B-216ENST00000529856 ZNF876PQ49A33 203 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 NHLRC2Q8NBF2 726 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 ZNF479Q96JC4 524 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 PRO0255Q9UI72 69 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 VAX2Q9UIW0 290 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 HHLA3Q9XRX5 114 aa8.82□□□□□ -1
CCDC90B-216ENST00000529856 TRGV4A0A0C4DH28 118 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 PGPEP1LA6NFU8 196 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 C9JCJ5 164 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 M0R036 132 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 PAX4O43316 350 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 PDE6DO43924 150 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 BCL2P10415 239 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 S100A4P26447 101 aaKnown RBP8.81□□□□□ -1
CCDC90B-216ENST00000529856 CRYBA4P53673 196 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms