RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PSMG4Q5JS54 123 aa11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 FOXI2Q6ZQN5 318 aa11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 DEFB125Q8N687 156 aa11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 OR9G4Q8NGQ1 327 aa11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 MAP1LC3CQ9BXW4 147 aa11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 MAP1LC3AQ9H492 121 aa11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 MUC21A0A0G2JKD1 596 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 MUC21A0A140T8X8 626 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 LINC01546A6NGU7 62 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 F6UB75 175 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 CSN3P07498 182 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 EDN2P20800 178 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 SSTP61278 116 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 MUC21Q5SSG8 566 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 PET117Q6UWS5 81 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 ZNF418Q8TF45 676 aaPredicted RBP11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 NDUFAF3Q9BU61 184 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 SIGLEC8Q9NYZ4 499 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 MSRB1Q9NZV6 116 aa11.07□□□□□ -0.64
ECHDC1-220ENST00000528402 ZNF688P0C7X2 276 aa11.06□□□□□ -0.64
ECHDC1-220ENST00000528402 IFI27P40305 119 aaPredicted RBP11.06□□□□□ -0.64
ECHDC1-220ENST00000528402 ANXA2RQ3ZCQ2 193 aa11.06□□□□□ -0.64
ECHDC1-220ENST00000528402 FAM159AQ6UWV7 190 aa11.06□□□□□ -0.64
ECHDC1-220ENST00000528402 JMJD8Q96S16 334 aa11.06□□□□□ -0.64
ECHDC1-220ENST00000528402 CENPEQ02224 2701 aa11.06□□□□□ -0.64
ECHDC1-220ENST00000528402 C7orf71A4D174 169 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 TFPI2P48307 235 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 SLURP1P55000 103 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 CTAG1AP78358 180 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 TDRG1Q3Y452 100 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 PRR31Q5SQ13 230 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 KLHL30-AS1Q8NEE0 82 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
ECHDC1-220ENST00000528402 TRAV25A0A0B4J276 109 aa11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 SYS1-DBNDD2H3BUS1 97 aa11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 H3BVH4 76 aa11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 PPP1R17O96001 155 aa11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 CDKN1BP46527 198 aa11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 LBHQ53QV2 105 aaPredicted RBP11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 SPATA12Q7Z6I5 190 aa11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 TEX15Q9BXT5 2789 aa11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 CSMD1Q96PZ7 3565 aa11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 MAP1AP78559 2803 aaPredicted RBP11.04□□□□□ -0.64
ECHDC1-220ENST00000528402 J3KRW8 73 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 TNFRSF6BO95407 300 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 NPYP01303 97 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 KHDC1LQ5JSQ8 128 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 ADAMTSL5Q6ZMM2 481 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 MRPL52Q86TS9 123 aaKnown RBP11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 DYNLRB2Q8TF09 96 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 MIEN1Q9BRT3 115 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 DPH3P1Q9H4G8 78 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 ESM1Q9NQ30 184 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 SVEP1Q4LDE5 3571 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 CHD6Q8TD26 2715 aa11.03□□□□□ -0.64
ECHDC1-220ENST00000528402 TRAV9-2A0A087WT02 112 aa11.02□□□□□ -0.64
ECHDC1-220ENST00000528402 LOC389332A0A1B0GUA5 103 aa11.02□□□□□ -0.64
ECHDC1-220ENST00000528402 A8MTW9 85 aa11.02□□□□□ -0.64
ECHDC1-220ENST00000528402 HBDP02042 147 aa11.02□□□□□ -0.64
ECHDC1-220ENST00000528402 EVI2AP22794 236 aa11.02□□□□□ -0.64
ECHDC1-220ENST00000528402 DEFB1P60022 68 aa11.02□□□□□ -0.64
ECHDC1-220ENST00000528402 OR2K2Q8NGT1 345 aa11.02□□□□□ -0.64
ECHDC1-220ENST00000528402 TSSC4Q9Y5U2 329 aaPredicted RBP11.02□□□□□ -0.64
ECHDC1-220ENST00000528402 NXPH4O95158 308 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 NDUFA7O95182 113 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 HILS1P60008 231 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 Q6ZQT7 251 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 C18orf65Q6ZTR6 163 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 Q8N8P6 123 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 DLX4Q92988 240 aaPredicted RBP11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 C14orf144Q96I85 54 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 ZNF747Q9BV97 191 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 PAM16Q9Y3D7 125 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 ITPR3Q14573 2671 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 OR4C46A6NHA9 309 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 SMKR1H3BMG3 65 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 K7EMI3 77 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 M0R381 172 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 GNRH2O43555 120 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 RNASE3P12724 160 aaKnown RBP11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 FHL3Q13643 280 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 DEFB114Q30KQ6 69 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 SPATA45Q537H7 98 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 ZNF705AQ6ZN79 300 aaPredicted RBP11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 AP1S3Q96PC3 154 aa11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
ECHDC1-220ENST00000528402 CELSR1Q9NYQ6 3014 aa11□□□□□ -0.65
ECHDC1-220ENST00000528402 FCER1GP30273 86 aa11□□□□□ -0.65
ECHDC1-220ENST00000528402 CMC4P56277 68 aaPredicted RBP11□□□□□ -0.65
ECHDC1-220ENST00000528402 POM121L12Q8N7R1 296 aa11□□□□□ -0.65
ECHDC1-220ENST00000528402 LINC01006Q8NI28 216 aa11□□□□□ -0.65
ECHDC1-220ENST00000528402 CLUHP3Q96NS8 147 aa11□□□□□ -0.65
ECHDC1-220ENST00000528402 C20orf78Q9BR46 151 aa11□□□□□ -0.65
ECHDC1-220ENST00000528402 ZANQ9Y493 2812 aa10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 TRAV12-3A0A0B4J271 114 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms