RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-212	ENST00000527805	LENEP	Q9Y5L5	61 aa		11.41	□□□□□ -0.58
ATM-212	ENST00000527805	TRAV8-6	A0A0B4J262	113 aa		11.41	□□□□□ -0.58
ATM-212	ENST00000527805	RBAKDN	A6NC62	111 aa		11.41	□□□□□ -0.58
ATM-212	ENST00000527805	TMEM61	Q8N0U2	210 aa		11.41	□□□□□ -0.58
ATM-212	ENST00000527805	CHCHD1	Q96BP2	118 aa	Known RBP	11.41	□□□□□ -0.58
ATM-212	ENST00000527805	DMRT1	Q9Y5R6	373 aa		11.41	□□□□□ -0.58
ATM-212	ENST00000527805	GAGE12B	A1L429	117 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	VCY	O14598	125 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	GAGE7	O76087	117 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	GAGE12F	P0CL80	117 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	GAGE12G	P0CL81	117 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	GAGE12I	P0CL82	117 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	SRSF2	Q01130	221 aa	Known RBP	11.4	□□□□□ -0.58
ATM-212	ENST00000527805	LAGE3	Q14657	143 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	SLC25A34	Q6PIV7	304 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	CSTL1	Q9H114	145 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	IGHV3-16	A0A0C4DH30	117 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805		K7EN84	100 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	XIRP2	A4UGR9	3374 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805		A0A087WX48	190 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	PRAC2	D3DTV9	90 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	TMEM158	Q8WZ71	300 aa		11.4	□□□□□ -0.58
ATM-212	ENST00000527805	TANC2	Q9HCD6	1990 aa		11.4	□□□□□ -0.59
ATM-212	ENST00000527805	SZT2	Q5T011	3432 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	MEIG1	Q5JSS6	88 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	TMEM256	Q8N2U0	113 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.39	□□□□□ -0.59
ATM-212	ENST00000527805	RHOD	O00212	210 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	EGR2	P11161	476 aa	Predicted RBP	11.39	□□□□□ -0.59
ATM-212	ENST00000527805	DEFB1	P60022	68 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	DAD1	P61803	113 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	C10orf91	Q5T1B1	145 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.39	□□□□□ -0.59
ATM-212	ENST00000527805	TOMM7	Q9P0U1	55 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	AZU1	P20160	251 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	OR2K2	Q8NGT1	345 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805	IFI27L1	Q96BM0	104 aa		11.39	□□□□□ -0.59
ATM-212	ENST00000527805		Q6ZS46	218 aa		11.38	□□□□□ -0.59
ATM-212	ENST00000527805	GNRH2	O43555	120 aa		11.38	□□□□□ -0.59
ATM-212	ENST00000527805	WIPF2	Q8TF74	440 aa	Predicted RBP	11.38	□□□□□ -0.59
ATM-212	ENST00000527805	IGLC2	P0DOY2	106 aa		11.38	□□□□□ -0.59
ATM-212	ENST00000527805	FAM104B	Q5XKR9	115 aa		11.38	□□□□□ -0.59
ATM-212	ENST00000527805		A8MWP6	167 aa		11.38	□□□□□ -0.59
ATM-212	ENST00000527805	LINC00469	Q8N7U9	141 aa		11.38	□□□□□ -0.59
ATM-212	ENST00000527805	UQCR10	Q9UDW1	63 aa		11.38	□□□□□ -0.59
ATM-212	ENST00000527805	PSMB2	P49721	201 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805		F5H768	121 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805	IGKV3D-20	A0A0C4DH25	116 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805		A8MWV9	139 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805	TNFRSF6B	O95407	300 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805	GSN-AS1	Q9NRJ2	163 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805	SMIM27	A0A1W2PRY6	76 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805	ADARB2-AS1	A8MUL3	147 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805	CIRBP	Q14011	172 aa	Known RBP	11.37	□□□□□ -0.59
ATM-212	ENST00000527805	PYGO2	Q9BRQ0	406 aa		11.37	□□□□□ -0.59
ATM-212	ENST00000527805		H3BRM9	83 aa		11.36	□□□□□ -0.59
ATM-212	ENST00000527805	CRX	O43186	299 aa	Predicted RBP	11.36	□□□□□ -0.59
ATM-212	ENST00000527805	HIST1H2BL	Q99880	126 aa		11.36	□□□□□ -0.59
ATM-212	ENST00000527805	ZNF702P	Q9H963	129 aa		11.36	□□□□□ -0.59
ATM-212	ENST00000527805	NDUFS6	O75380	124 aa	Known RBP	11.36	□□□□□ -0.59
ATM-212	ENST00000527805	MRAP	Q8TCY5	172 aa		11.36	□□□□□ -0.59
ATM-212	ENST00000527805	TRAV25	A0A0B4J276	109 aa		11.36	□□□□□ -0.59
ATM-212	ENST00000527805	MRAP2	Q96G30	205 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	C1orf159	Q96HA4	380 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.35	□□□□□ -0.59
ATM-212	ENST00000527805	NACA	E9PAV3	2078 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.35	□□□□□ -0.59
ATM-212	ENST00000527805	PSMG3-AS1	Q96PY0	264 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	HIST1H4G	Q99525	98 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	HIST2H2BD	Q6DRA6	164 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	LINC01006	Q8NI28	216 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	ZNF503	Q96F45	646 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805		A6NDN8	102 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	SPRY2	O43597	315 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	HILS1	P60008	231 aa		11.35	□□□□□ -0.59
ATM-212	ENST00000527805	TRPT1	Q86TN4	253 aa	Known RBP	11.35	□□□□□ -0.59
ATM-212	ENST00000527805	GAGE12J	A6NER3	117 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	RNASE1	P07998	156 aa	Known RBP	11.34	□□□□□ -0.59
ATM-212	ENST00000527805	ZNF25	P17030	456 aa	Predicted RBP	11.34	□□□□□ -0.59
ATM-212	ENST00000527805	GAGE1	Q13065	139 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	GAGE4	Q13068	117 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	GAGE5	Q13069	117 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	GAGE13	Q4V321	117 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	HIST3H2BB	Q8N257	126 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	C14orf144	Q96I85	54 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	GCSH	P23434	173 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	RPL24	P83731	157 aa	Known RBP	11.34	□□□□□ -0.59
ATM-212	ENST00000527805	SPX	Q9BT56	116 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	MRPL16	Q9NX20	251 aa	Known RBP	11.34	□□□□□ -0.59
ATM-212	ENST00000527805	WDFY4	Q6ZS81	3184 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	LINC01549	A6NIU2	74 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	SNAI2	O43623	268 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	ARL6IP6	Q8N6S5	226 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	LAMTOR2	Q9Y2Q5	125 aa		11.34	□□□□□ -0.59
ATM-212	ENST00000527805	CRP	P02741	224 aa		11.33	□□□□□ -0.6
ATM-212	ENST00000527805	PCP4	P48539	62 aa		11.33	□□□□□ -0.6
ATM-212	ENST00000527805	NDUFA11	Q86Y39	141 aa		11.33	□□□□□ -0.6
ATM-212	ENST00000527805	LINC00518	Q8N0U6	118 aa		11.33	□□□□□ -0.6
ATM-212	ENST00000527805	TRAV26-2	A0A0B4J265	109 aa		11.33	□□□□□ -0.6
ATM-212	ENST00000527805	SLA	Q13239	276 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms