RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GAS8-AS1O95177 125 aa11.6□□□□□ -0.55
USH1C-207ENST00000527720 PCP4P48539 62 aa11.6□□□□□ -0.55
USH1C-207ENST00000527720 Q6ZQT7 251 aa11.6□□□□□ -0.55
USH1C-207ENST00000527720 TGFAP01135 160 aa11.6□□□□□ -0.55
USH1C-207ENST00000527720 LEPP41159 167 aa11.6□□□□□ -0.55
USH1C-207ENST00000527720 FXYD7P58549 80 aa11.6□□□□□ -0.55
USH1C-207ENST00000527720 NRACQ8N912 160 aa11.6□□□□□ -0.55
USH1C-207ENST00000527720 SVIPQ8NHG7 77 aa11.6□□□□□ -0.55
USH1C-207ENST00000527720 CELSR2Q9HCU4 2923 aa11.59□□□□□ -0.55
USH1C-207ENST00000527720 ASIPP42127 132 aa11.59□□□□□ -0.55
USH1C-207ENST00000527720 TMEM95Q3KNT9 176 aa11.59□□□□□ -0.55
USH1C-207ENST00000527720 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
USH1C-207ENST00000527720 C12orf54Q6X4T0 127 aa11.59□□□□□ -0.55
USH1C-207ENST00000527720 CSPG4Q6UVK1 2322 aa11.59□□□□□ -0.55
USH1C-207ENST00000527720 ANKRD17O75179 2603 aaKnown RBP11.59□□□□□ -0.55
USH1C-207ENST00000527720 GATA1P15976 413 aaPredicted RBP11.58□□□□□ -0.55
USH1C-207ENST00000527720 CBY1Q9Y3M2 126 aa11.58□□□□□ -0.55
USH1C-207ENST00000527720 FSHBP01225 129 aa11.58□□□□□ -0.56
USH1C-207ENST00000527720 ORAOV1Q8WV07 137 aa11.58□□□□□ -0.56
USH1C-207ENST00000527720 CR1P17927 2039 aa11.58□□□□□ -0.56
USH1C-207ENST00000527720 PRB1P04280 392 aa11.57□□□□□ -0.56
USH1C-207ENST00000527720 S100A4P26447 101 aaKnown RBP11.57□□□□□ -0.56
USH1C-207ENST00000527720 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
USH1C-207ENST00000527720 VPREB3Q9UKI3 123 aa11.57□□□□□ -0.56
USH1C-207ENST00000527720 MYO18BQ8IUG5 2567 aa11.57□□□□□ -0.56
USH1C-207ENST00000527720 J3KRW8 73 aa11.57□□□□□ -0.56
USH1C-207ENST00000527720 ANXA2RQ3ZCQ2 193 aa11.57□□□□□ -0.56
USH1C-207ENST00000527720 MPV17L2Q567V2 206 aa11.57□□□□□ -0.56
USH1C-207ENST00000527720 F6UB75 175 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 RNASE4P34096 147 aaKnown RBP11.56□□□□□ -0.56
USH1C-207ENST00000527720 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 CRYBG3Q68DQ2 2970 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 IGKV3-7A0A075B6H7 116 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 KLLNB2CW77 178 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 NUDT3O95989 172 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 DEFB1P60022 68 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 LAGE3Q14657 143 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 Q6YL49 198 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 TMEM158Q8WZ71 300 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 BBC3Q96PG8 261 aaPredicted RBP11.56□□□□□ -0.56
USH1C-207ENST00000527720 DPH3P1Q9H4G8 78 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 PHLDA3Q9Y5J5 127 aa11.56□□□□□ -0.56
USH1C-207ENST00000527720 ATP5LO75964 103 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 ELANEP08246 267 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
USH1C-207ENST00000527720 BVES-AS1Q5T3Y7 98 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 ZNF843Q8N446 348 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 BEX4Q9NWD9 120 aaPredicted RBP11.55□□□□□ -0.56
USH1C-207ENST00000527720 COX11Q9Y6N1 276 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 LRRC75A-AS1Q8N1F1 130 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 MYOZ3Q8TDC0 251 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 ODF3Q96PU9 254 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 ZMAT4Q9H898 229 aa11.55□□□□□ -0.56
USH1C-207ENST00000527720 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
USH1C-207ENST00000527720 RNF223E7ERA6 249 aa11.54□□□□□ -0.56
USH1C-207ENST00000527720 IGHV4-31P0DP07 118 aa11.54□□□□□ -0.56
USH1C-207ENST00000527720 FGF6P10767 208 aa11.54□□□□□ -0.56
USH1C-207ENST00000527720 C18orf15Q96N68 181 aa11.54□□□□□ -0.56
USH1C-207ENST00000527720 USP24Q9UPU5 2620 aa11.54□□□□□ -0.56
USH1C-207ENST00000527720 PRRC2AP48634 2157 aaKnown RBP11.54□□□□□ -0.56
USH1C-207ENST00000527720 K7EMI3 77 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 M0R381 172 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 LGALS9O00182 355 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 CD5LO43866 347 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 LGALS1P09382 135 aaKnown RBP11.53□□□□□ -0.56
USH1C-207ENST00000527720 C2orf91Q6ZV80 131 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 BOD1L2Q8IYS8 172 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 C20orf78Q9BR46 151 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 SIVA1O15304 175 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 NXPH4O95158 308 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 NPSP0C0P6 89 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 SMIM17P0DL12 118 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 KIR3DS1Q14943 382 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 ODF1Q14990 250 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 SMIM2Q9BVW6 85 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 DKK2Q9UBU2 259 aa11.53□□□□□ -0.56
USH1C-207ENST00000527720 UTP20O75691 2785 aaKnown RBP11.52□□□□□ -0.56
USH1C-207ENST00000527720 PPP1R17O96001 155 aa11.52□□□□□ -0.56
USH1C-207ENST00000527720 RNASE3P12724 160 aaKnown RBP11.52□□□□□ -0.56
USH1C-207ENST00000527720 SRD5A1P18405 259 aa11.52□□□□□ -0.56
USH1C-207ENST00000527720 EDN2P20800 178 aa11.52□□□□□ -0.56
USH1C-207ENST00000527720 C10orf99Q6UWK7 81 aa11.52□□□□□ -0.56
USH1C-207ENST00000527720 MAPK1IP1LQ8NDC0 245 aa11.52□□□□□ -0.56
USH1C-207ENST00000527720 OR9G4Q8NGQ1 327 aa11.52□□□□□ -0.56
USH1C-207ENST00000527720 AP1S3Q96PC3 154 aa11.52□□□□□ -0.56
USH1C-207ENST00000527720 MAP1AP78559 2803 aaPredicted RBP11.52□□□□□ -0.57
USH1C-207ENST00000527720 PRSS1P07477 247 aa11.52□□□□□ -0.57
USH1C-207ENST00000527720 WFDC3Q8IUB2 231 aa11.52□□□□□ -0.57
USH1C-207ENST00000527720 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
USH1C-207ENST00000527720 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.57
USH1C-207ENST00000527720 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
USH1C-207ENST00000527720 SNRPD3P62318 126 aaKnown RBP11.51□□□□□ -0.57
USH1C-207ENST00000527720 DEFB113Q30KQ7 82 aa11.51□□□□□ -0.57
USH1C-207ENST00000527720 POM121L12Q8N7R1 296 aa11.51□□□□□ -0.57
USH1C-207ENST00000527720 A1L4Q6 167 aa11.51□□□□□ -0.57
USH1C-207ENST00000527720 GNRH2O43555 120 aa11.51□□□□□ -0.57
USH1C-207ENST00000527720 ORMDL2Q53FV1 153 aa11.51□□□□□ -0.57
USH1C-207ENST00000527720 FAM159AQ6UWV7 190 aa11.51□□□□□ -0.57
USH1C-207ENST00000527720 UBR5O95071 2799 aaPredicted RBP11.51□□□□□ -0.57
USH1C-207ENST00000527720 MUC4Q99102 2169 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms