RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
LTBP3-208ENST00000527339 ZNF415Q09FC8 603 aa12.25□□□□□ -0.45
LTBP3-208ENST00000527339 LGALS9CQ6DKI2 356 aa12.25□□□□□ -0.45
LTBP3-208ENST00000527339 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
LTBP3-208ENST00000527339 KLF12Q9Y4X4 402 aa12.25□□□□□ -0.45
LTBP3-208ENST00000527339 GAGE12BA1L429 117 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 GAGE7O76087 117 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 GCGP01275 180 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 GAGE12FP0CL80 117 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 GAGE12GP0CL81 117 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 GAGE12IP0CL82 117 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 Q6ZTI0 123 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 Q86TA4 180 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 FMC1Q96HJ9 113 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 MANBALQ9NQG1 85 aa12.24□□□□□ -0.45
LTBP3-208ENST00000527339 SPINK4O60575 86 aa12.23□□□□□ -0.45
LTBP3-208ENST00000527339 PFN1P07737 140 aaKnown RBP12.23□□□□□ -0.45
LTBP3-208ENST00000527339 ZNF80P51504 273 aaPredicted RBP12.23□□□□□ -0.45
LTBP3-208ENST00000527339 NKX2-5P52952 324 aaPredicted RBP12.23□□□□□ -0.45
LTBP3-208ENST00000527339 UBE2G1P62253 170 aa12.23□□□□□ -0.45
LTBP3-208ENST00000527339 TMEM183BQ1AE95 376 aa12.23□□□□□ -0.45
LTBP3-208ENST00000527339 TMEM183AQ8IXX5 376 aa12.23□□□□□ -0.45
LTBP3-208ENST00000527339 KCNS1Q96KK3 526 aa12.23□□□□□ -0.45
LTBP3-208ENST00000527339 TRGV1A0A0A0MS02 117 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 TRBV6-1A0A0K0K1D8 114 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 F5H768 121 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 AKR1C3P42330 323 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 CCL20P78556 96 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 LGALS9BQ3B8N2 356 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 C18orf15Q96N68 181 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 SDF2L1Q9HCN8 221 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 ZFP30Q9Y2G7 519 aa12.22□□□□□ -0.45
LTBP3-208ENST00000527339 TMEM88Q6PEY1 159 aa12.21□□□□□ -0.45
LTBP3-208ENST00000527339 SPXQ9BT56 116 aa12.21□□□□□ -0.45
LTBP3-208ENST00000527339 GNG13Q9P2W3 67 aa12.21□□□□□ -0.45
LTBP3-208ENST00000527339 DNAH17Q9UFH2 4485 aa12.21□□□□□ -0.46
LTBP3-208ENST00000527339 MUC4Q99102 2169 aa12.2□□□□□ -0.46
LTBP3-208ENST00000527339 TRGV2A0A075B6R0 118 aa12.2□□□□□ -0.46
LTBP3-208ENST00000527339 SCO2A0A1W2PP80 73 aa12.2□□□□□ -0.46
LTBP3-208ENST00000527339 TYMSP04818 313 aa12.2□□□□□ -0.46
LTBP3-208ENST00000527339 S100A9P06702 114 aaKnown RBP12.2□□□□□ -0.46
LTBP3-208ENST00000527339 ALKAL2Q6UX46 152 aa12.2□□□□□ -0.46
LTBP3-208ENST00000527339 COX8CQ7Z4L0 72 aa12.2□□□□□ -0.46
LTBP3-208ENST00000527339 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
LTBP3-208ENST00000527339 TXNDC17Q9BRA2 123 aa12.2□□□□□ -0.46
LTBP3-208ENST00000527339 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
LTBP3-208ENST00000527339 GNRH2O43555 120 aa12.19□□□□□ -0.46
LTBP3-208ENST00000527339 LTAP01374 205 aa12.19□□□□□ -0.46
LTBP3-208ENST00000527339 IFNA1P01562 189 aa12.19□□□□□ -0.46
LTBP3-208ENST00000527339 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
LTBP3-208ENST00000527339 C11orf21Q9P2W6 132 aa12.19□□□□□ -0.46
LTBP3-208ENST00000527339 FABP5P3A8MUU1 101 aa12.18□□□□□ -0.46
LTBP3-208ENST00000527339 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
LTBP3-208ENST00000527339 DYNC1H1Q14204 4646 aaKnown RBP12.17□□□□□ -0.46
LTBP3-208ENST00000527339 P0DMU3 169 aa12.17□□□□□ -0.46
LTBP3-208ENST00000527339 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
LTBP3-208ENST00000527339 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
LTBP3-208ENST00000527339 BLOC1S1P78537 153 aa12.17□□□□□ -0.46
LTBP3-208ENST00000527339 ZC2HC1AQ96GY0 325 aa12.17□□□□□ -0.46
LTBP3-208ENST00000527339 ABCA13Q86UQ4 5058 aa12.16□□□□□ -0.46
LTBP3-208ENST00000527339 HOXA5P20719 270 aa12.16□□□□□ -0.46
LTBP3-208ENST00000527339 OR5I1Q13606 314 aa12.16□□□□□ -0.46
LTBP3-208ENST00000527339 RASL10AQ92737 203 aa12.16□□□□□ -0.46
LTBP3-208ENST00000527339 C11orf52Q96A22 123 aa12.16□□□□□ -0.46
LTBP3-208ENST00000527339 M0R2P5 195 aa12.15□□□□□ -0.46
LTBP3-208ENST00000527339 BCL2P10415 239 aa12.15□□□□□ -0.46
LTBP3-208ENST00000527339 TAGLN2P37802 199 aaKnown RBP12.15□□□□□ -0.46
LTBP3-208ENST00000527339 CRIP1P50238 77 aa12.15□□□□□ -0.46
LTBP3-208ENST00000527339 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
LTBP3-208ENST00000527339 FAM162BQ5T6X4 162 aa12.15□□□□□ -0.46
LTBP3-208ENST00000527339 PDE6DO43924 150 aa12.14□□□□□ -0.47
LTBP3-208ENST00000527339 ZNF674Q2M3X9 581 aa12.14□□□□□ -0.47
LTBP3-208ENST00000527339 BAGE2Q86Y30 109 aa12.14□□□□□ -0.47
LTBP3-208ENST00000527339 TRAV26-1A0A087WT03 109 aa12.13□□□□□ -0.47
LTBP3-208ENST00000527339 IGKV3D-20A0A0C4DH25 116 aa12.13□□□□□ -0.47
LTBP3-208ENST00000527339 H3BNG1 76 aa12.13□□□□□ -0.47
LTBP3-208ENST00000527339 SH2D1AO60880 128 aa12.13□□□□□ -0.47
LTBP3-208ENST00000527339 MLST8Q9BVC4 326 aa12.13□□□□□ -0.47
LTBP3-208ENST00000527339 VAX2Q9UIW0 290 aa12.13□□□□□ -0.47
LTBP3-208ENST00000527339 DNAH11Q96DT5 4516 aa12.13□□□□□ -0.47
LTBP3-208ENST00000527339 B4DEV8 164 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 NUDT3O95989 172 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 ORM1P02763 201 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
LTBP3-208ENST00000527339 RPL35P42766 123 aaKnown RBP12.12□□□□□ -0.47
LTBP3-208ENST00000527339 POM121L12Q8N7R1 296 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 NHLRC2Q8NBF2 726 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 LYPD6BQ8NI32 183 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 PKD1P98161 4303 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
LTBP3-208ENST00000527339 A0A0J9YY99 117 aa12.11□□□□□ -0.47
LTBP3-208ENST00000527339 KRBOX1C9JBD0 128 aa12.11□□□□□ -0.47
LTBP3-208ENST00000527339 IGHV3-53P01767 116 aa12.11□□□□□ -0.47
LTBP3-208ENST00000527339 S100A4P26447 101 aaKnown RBP12.11□□□□□ -0.47
LTBP3-208ENST00000527339 ASIPP42127 132 aa12.11□□□□□ -0.47
LTBP3-208ENST00000527339 RNF212Q495C1 297 aa12.11□□□□□ -0.47
LTBP3-208ENST00000527339 DERL1Q9BUN8 251 aa12.11□□□□□ -0.47
LTBP3-208ENST00000527339 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms