RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 RP1P56715 2156 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 TRAV17A0A0B4J275 112 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 SNCGO76070 127 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 IL5P05113 134 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 SMIM6P0DI80 62 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 PIPP12273 146 aaPredicted RBP2.25□□□□□ -2.05
USP47-206ENST00000525367 RBP2P50120 134 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 TPPP2P59282 170 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 PPP3R1P63098 170 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 Q56UQ5 140 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 UNQ5815/PRO19632Q6UWF5 114 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 PPDPFLQ8WWR9 84 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 C14orf144Q96I85 54 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 TMEM242Q9NWH2 141 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 COL11A1P12107 1806 aaPredicted RBP2.25□□□□□ -2.05
USP47-206ENST00000525367 SPEF2Q9C093 1822 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 COL24A1Q17RW2 1714 aa2.25□□□□□ -2.05
USP47-206ENST00000525367 IGLV3-32A0A0A0MS00 114 aa2.24□□□□□ -2.05
USP47-206ENST00000525367 TMEM30CPA0ZSE6 113 aa2.24□□□□□ -2.05
USP47-206ENST00000525367 NDUFB6O95139 128 aa2.24□□□□□ -2.05
USP47-206ENST00000525367 SPANXN1Q5VSR9 72 aa2.24□□□□□ -2.05
USP47-206ENST00000525367 TMEM14CQ9P0S9 112 aa2.24□□□□□ -2.05
USP47-206ENST00000525367 SERP1Q9Y6X1 66 aa2.24□□□□□ -2.05
USP47-206ENST00000525367 USP54Q70EL1 1684 aa2.24□□□□□ -2.05
USP47-206ENST00000525367 FREM3P0C091 2139 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 COL4A5P29400 1685 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 SPAARA0A1B0GVQ0 90 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 APOC4-APOC2K7ER74 178 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 TNFP01375 233 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 APOC2P02655 101 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 PIRTP0C851 137 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 DEFB103AP81534 67 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 ERBINQ96RT1 1412 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 ADGRB1O14514 1584 aa2.23□□□□□ -2.05
USP47-206ENST00000525367 MICAL3Q7RTP6 2002 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 CFTRP13569 1480 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 CECR2Q9BXF3 1484 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 PIGBOS1A0A0B4J2F0 54 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 A0A0J9YY99 117 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 MCRIP1C9JLW8 97 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 JMJD7-PLA2G4BH0Y9G9 81 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 CCL25O15444 150 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 KLF7O75840 302 aaPredicted RBP2.22□□□□□ -2.05
USP47-206ENST00000525367 DNAL4O96015 105 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 PPYP01298 95 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 IL7P13232 177 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 GTF2H5Q6ZYL4 71 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 C15orf53Q8NAA6 179 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 IER3IP1Q9Y5U9 82 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
USP47-206ENST00000525367 WDR97A6NE52 1622 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 RTTNQ86VV8 2226 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 A6NIN4 97 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 M0R2N4 97 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 INE1O15225 51 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 PHLPP1O60346 1717 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 GYPBP06028 91 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 RPL7L1Q6DKI1 246 aaKnown RBP2.21□□□□□ -2.06
USP47-206ENST00000525367 MRPL54Q6P161 138 aaKnown RBP2.21□□□□□ -2.06
USP47-206ENST00000525367 ZNF625Q96I27 306 aaPredicted RBP2.21□□□□□ -2.06
USP47-206ENST00000525367 BRWD1Q9NSI6 2320 aa2.21□□□□□ -2.06
USP47-206ENST00000525367 KTN1Q86UP2 1357 aaKnown RBP2.21□□□□□ -2.06
USP47-206ENST00000525367 MDC1Q14676 2089 aaKnown RBP2.21□□□□□ -2.06
USP47-206ENST00000525367 IGKCP01834 107 aa2.2□□□□□ -2.06
USP47-206ENST00000525367 Q6AWC8 147 aa2.2□□□□□ -2.06
USP47-206ENST00000525367 LYPD5Q6UWN5 251 aa2.2□□□□□ -2.06
USP47-206ENST00000525367 TMEM141Q96I45 108 aa2.2□□□□□ -2.06
USP47-206ENST00000525367 WFDC10AQ9H1F0 79 aa2.2□□□□□ -2.06
USP47-206ENST00000525367 COA4Q9NYJ1 87 aa2.2□□□□□ -2.06
USP47-206ENST00000525367 NDUFA12Q9UI09 145 aa2.2□□□□□ -2.06
USP47-206ENST00000525367 ICE1Q9Y2F5 2266 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 LAMB2P55268 1798 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 S100A8P05109 93 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 SLC25A6P12236 298 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 C12orf73Q69YU5 71 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 CSAG1Q6PB30 78 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 LINC00322Q6ZN03 302 aaPredicted RBP2.19□□□□□ -2.06
USP47-206ENST00000525367 ATG5Q9H1Y0 275 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 MRPL36Q9P0J6 103 aaKnown RBP2.19□□□□□ -2.06
USP47-206ENST00000525367 CCNB3Q8WWL7 1395 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 A2ML1A8K2U0 1454 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 MRC2Q9UBG0 1479 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 MYH1P12882 1939 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 SMARCA2P51531 1590 aa2.19□□□□□ -2.06
USP47-206ENST00000525367 FN1P02751 2386 aaKnown RBP2.18□□□□□ -2.06
USP47-206ENST00000525367 LOC110117498A0A087WWA1 95 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 IGHV3-30P01768 117 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 IGHV3-30-5P0DP03 117 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 CATR1Q13166 79 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 IQCJQ1A5X6 159 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 C8orf59Q8N0T1 100 aaPredicted RBP2.18□□□□□ -2.06
USP47-206ENST00000525367 SVBPQ8N300 66 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 DMAC1Q96GE9 116 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 RPRMQ9NS64 109 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 MYOM2P54296 1465 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 KIAA1549Q9HCM3 1950 aa2.18□□□□□ -2.06
USP47-206ENST00000525367 HELZP42694 1942 aaKnown RBP2.17□□□□□ -2.06
USP47-206ENST00000525367 TRAV23DV6A0A075B6W5 121 aa2.17□□□□□ -2.06
USP47-206ENST00000525367 TMEM218A2RU14 115 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms