RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CDK5R1Q15078 307 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 HIGD2BQ4VC39 106 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 C2orf83Q53S99 150 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 C6orf52Q5T4I8 152 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 GFI1BQ5VTD9 330 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 FAM216BQ8N7L0 139 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 OR4X2Q8NGF9 303 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 TYMSOSQ8TAI1 123 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 SMDT1Q9H4I9 107 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 MED9Q9NWA0 146 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 RPL26L1Q9UNX3 145 aaKnown RBP2.97□□□□□ -1.93
CD44-213ENST00000525209 PLXNB1O43157 2135 aa2.96□□□□□ -1.93
CD44-213ENST00000525209 IGKV1OR2-108A0A075B7D4 117 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 IGHV3-73A0A0B4J1V6 119 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 C7orf66A4D0T2 115 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 A8MUU9 505 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 SDCBPO00560 298 aaPredicted RBP2.96□□□□□ -1.94
CD44-213ENST00000525209 YPEL1O60688 119 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 RBP4P02753 201 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 IGKV2-30P06310 120 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 IGLC1P0CG04 106 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 BLCAPP62952 87 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 SUPT4H1P63272 117 aaKnown RBP2.96□□□□□ -1.94
CD44-213ENST00000525209 MRPS36P82909 103 aaKnown RBP2.96□□□□□ -1.94
CD44-213ENST00000525209 ZNF846Q147U1 533 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 UBE2SQ16763 222 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 ZC2HC1BQ5TFG8 222 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 IGFL3Q6UXB1 125 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 C2orf91Q6ZV80 131 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 DYNAPQ8N1N2 210 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 SPANXA2-OT1Q8N9U9 137 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 CCL4L1Q8NHW4 92 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 MUC7Q8TAX7 377 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 LSM10Q969L4 123 aaKnown RBP2.96□□□□□ -1.94
CD44-213ENST00000525209 RAB37Q96AX2 223 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 MRPS24Q96EL2 167 aaKnown RBP2.96□□□□□ -1.94
CD44-213ENST00000525209 AQP10Q96PS8 301 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 VAMP8Q9BV40 100 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 BCL2L10Q9HD36 194 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 VPS13AQ96RL7 3174 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 LAMA4Q16363 1823 aa2.96□□□□□ -1.94
CD44-213ENST00000525209 GREB1Q4ZG55 1949 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 CACNA1HO95180 2353 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 IGHV3-15A0A0B4J1V0 119 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 MDFIC2A0A1B0GVS7 189 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 OOSP1A8MZH6 123 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 M0R2P5 195 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 ZNF737O75373 536 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 TRACP01848 142 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 SLC25A4P12235 298 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 FABP4P15090 132 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 CD24P25063 80 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 XCL1P47992 114 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 FOXF1Q12946 379 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 KHDC3LQ587J8 217 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 Q6ZS92 163 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 LYZL2Q7Z4W2 148 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 OR5AS1Q8N127 324 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 DEFB119Q8N690 84 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 Q8NDZ9 215 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 DEFB124Q8NES8 71 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 FGF13Q92913 245 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 IMMP2LQ96T52 175 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 AP4S1Q9Y587 144 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 LINC00312Q9Y6C7 94 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 CEP192Q8TEP8 1941 aa2.95□□□□□ -1.94
CD44-213ENST00000525209 ACACBO00763 2458 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 IGKV1D-37A0A075B6S9 117 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 A0A0B4J2C4 111 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 RPL36A-HNRNPH2H7BZ11 118 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 HYPMO75409 117 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 PRB1P04280 392 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 LINC00032P0C843 101 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 SAA1P0DJI8 122 aaPredicted RBP2.94□□□□□ -1.94
CD44-213ENST00000525209 NFYAP23511 347 aaPredicted RBP2.94□□□□□ -1.94
CD44-213ENST00000525209 FUSP35637 526 aaKnown RBP eCLIP2.94□□□□□ -1.94
CD44-213ENST00000525209 MPV17P39210 176 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 RPL28P46779 137 aaKnown RBP2.94□□□□□ -1.94
CD44-213ENST00000525209 PCBD1P61457 104 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 RPRMLQ8N4K4 120 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 OR5AK2Q8NH90 309 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 TAS2R4Q9NYW5 299 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 ZNF407Q9C0G0 2248 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 ARID1AO14497 2285 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 ATRXP46100 2492 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 WDR87Q6ZQQ6 2873 aa2.94□□□□□ -1.94
CD44-213ENST00000525209 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 CNOT1A5YKK6 2376 aaKnown RBP2.93□□□□□ -1.94
CD44-213ENST00000525209 PTPRBP23467 1997 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 PLIN4Q96Q06 1357 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 A0A0D9SFI3 127 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 LOC107986453A0A1B0GWG9 222 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 A0A1W2PQD3 144 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 K7EM74 188 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 CREBL2O60519 120 aaPredicted RBP2.93□□□□□ -1.94
CD44-213ENST00000525209 TIMM17BO60830 172 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 GYPBP06028 91 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 ZNF705BP0CI00 300 aaPredicted RBP2.93□□□□□ -1.94
CD44-213ENST00000525209 COX6A1P12074 109 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 IL7P13232 177 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms