RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 PRELID1Q9Y255 219 aa4.73□□□□□ -1.65
PUM1-213ENST00000524516 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
PUM1-213ENST00000524516 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
PUM1-213ENST00000524516 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
PUM1-213ENST00000524516 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
PUM1-213ENST00000524516 AGPAT2O15120 278 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 TYMSP04818 313 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 AKR1C4P17516 323 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 SMCPP49901 116 aaPredicted RBP4.72□□□□□ -1.65
PUM1-213ENST00000524516 SMCO1Q147U7 214 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 HIGD2BQ4VC39 106 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 Q6AWC8 147 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 PRR27Q6MZM9 219 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 LINC00173Q6ZV60 143 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 ZFAND1Q8TCF1 268 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 GLYATL2Q8WU03 294 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 RAB2BQ8WUD1 216 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 KCNS1Q96KK3 526 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 CHCHD5Q9BSY4 110 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 PPDPFQ9H3Y8 114 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 AAMDCQ9H7C9 122 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 BATF3Q9NR55 127 aa4.72□□□□□ -1.65
PUM1-213ENST00000524516 PRSS46E5RG02 174 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 PRSS3P35030 304 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 RAB5CP51148 216 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 PKIAP61925 76 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 RPP30P78346 268 aaKnown RBP4.71□□□□□ -1.66
PUM1-213ENST00000524516 KRTAP20-1Q3LI63 56 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 C4orf48Q5BLP8 95 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 PXDC1Q5TGL8 231 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 C14orf178Q8N769 122 aaPredicted RBP4.71□□□□□ -1.66
PUM1-213ENST00000524516 OR10G7Q8NGN6 311 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 PRR34Q9NV39 138 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 CARHSP1Q9Y2V2 147 aaKnown RBP4.71□□□□□ -1.66
PUM1-213ENST00000524516 TIMM9Q9Y5J7 89 aa4.71□□□□□ -1.66
PUM1-213ENST00000524516 TRBV7-9A0A0J9YWB2 115 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 TRDV1A0A1B0GX56 115 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 FAM24AA6NFZ4 105 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 GOSR2O14653 212 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 CAV2P51636 162 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 ZNF506Q5JVG8 444 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 C10orf113Q5VZT2 155 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 CFAP161Q6P656 301 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 EXOC3-AS1Q8N2X6 119 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 GPX8Q8TED1 209 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 PARLQ9H300 379 aa4.7□□□□□ -1.66
PUM1-213ENST00000524516 TRBV19A0A075B6N1 114 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 TRBV6-8A0A0A6YYG3 113 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 WRBO00258 174 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 EIF3GO75821 320 aaKnown RBP eCLIP4.69□□□□□ -1.66
PUM1-213ENST00000524516 ATP6V1G2O95670 118 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 AMTP48728 403 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 RAB2AP61019 212 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 SLC38A11Q08AI6 406 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 SPANXN5Q5MJ07 72 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 ZFP2Q6ZN57 461 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 PRSS48Q7RTY5 328 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 PACRGLQ8N7B6 248 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 OR51S1Q8NGJ8 323 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 S100A16Q96FQ6 103 aaKnown RBP4.69□□□□□ -1.66
PUM1-213ENST00000524516 NAA60Q9H7X0 242 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 SCN3BQ9NY72 215 aa4.69□□□□□ -1.66
PUM1-213ENST00000524516 PGPEP1LA6NFU8 196 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 PTTG1O95997 202 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 GZMBP10144 247 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 TBPP20226 339 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 MXD1Q05195 221 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 REG3AQ06141 175 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 ZNF674Q2M3X9 581 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 C15orf56Q8N910 161 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 ASB13Q8WXK3 278 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 CIB3Q96Q77 187 aaPredicted RBP4.68□□□□□ -1.66
PUM1-213ENST00000524516 SOSTQ9BQB4 213 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 MIXL1Q9H2W2 232 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 NDUFB11Q9NX14 153 aa4.68□□□□□ -1.66
PUM1-213ENST00000524516 C14orf166Q9Y224 244 aaKnown RBP4.68□□□□□ -1.66
PUM1-213ENST00000524516 A0A087WZ39 114 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 TRAV8-4A0A0B4J246 113 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 A8MWV9 139 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 H3BP45 60 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 P01737 135 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 RRAS2P62070 204 aaPredicted RBP4.67□□□□□ -1.66
PUM1-213ENST00000524516 RBX1P62877 108 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 GAGE2BQ13066 116 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 KRTAP19-2Q3LHN2 52 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 SCGB2B2Q4G0G5 96 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 RNASE10Q5GAN6 216 aaKnown RBP4.67□□□□□ -1.66
PUM1-213ENST00000524516 PHF5AQ7RTV0 110 aaKnown RBP4.67□□□□□ -1.66
PUM1-213ENST00000524516 LHFPL1Q86WI0 220 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 RPP21Q9H633 154 aaKnown RBP4.67□□□□□ -1.66
PUM1-213ENST00000524516 GPN1Q9HCN4 374 aaPredicted RBP4.67□□□□□ -1.66
PUM1-213ENST00000524516 PRR13Q9NZ81 148 aa4.67□□□□□ -1.66
PUM1-213ENST00000524516 USH2AO75445 5202 aa4.66□□□□□ -1.66
PUM1-213ENST00000524516 TRAV21A0A0B4J279 112 aa4.66□□□□□ -1.66
PUM1-213ENST00000524516 A0A1W2PNN7 141 aa4.66□□□□□ -1.66
PUM1-213ENST00000524516 MED6O75586 246 aa4.66□□□□□ -1.66
PUM1-213ENST00000524516 NDUFB4O95168 129 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms