RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 IGLL5B9A064 214 aa10.68□□□□□ -0.7
SF3B2-202ENST00000524475 LTAP01374 205 aa10.68□□□□□ -0.7
SF3B2-202ENST00000524475 ATP5G1P05496 136 aa10.68□□□□□ -0.7
SF3B2-202ENST00000524475 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
SF3B2-202ENST00000524475 AKR1C3P42330 323 aa10.68□□□□□ -0.7
SF3B2-202ENST00000524475 ZNF80P51504 273 aaPredicted RBP10.68□□□□□ -0.7
SF3B2-202ENST00000524475 UBE2G1P62253 170 aa10.68□□□□□ -0.7
SF3B2-202ENST00000524475 LINC00476Q8WZB0 136 aa10.68□□□□□ -0.7
SF3B2-202ENST00000524475 C11orf52Q96A22 123 aa10.68□□□□□ -0.7
SF3B2-202ENST00000524475 GNG13Q9P2W3 67 aa10.68□□□□□ -0.7
SF3B2-202ENST00000524475 IFNA1P01562 189 aa10.67□□□□□ -0.7
SF3B2-202ENST00000524475 BLOC1S1P78537 153 aa10.67□□□□□ -0.7
SF3B2-202ENST00000524475 MUC21Q5SSG8 566 aa10.67□□□□□ -0.7
SF3B2-202ENST00000524475 ALKAL2Q6UX46 152 aa10.67□□□□□ -0.7
SF3B2-202ENST00000524475 LYPD6BQ8NI32 183 aa10.67□□□□□ -0.7
SF3B2-202ENST00000524475 SPXQ9BT56 116 aa10.67□□□□□ -0.7
SF3B2-202ENST00000524475 SCO2A0A1W2PP80 73 aa10.66□□□□□ -0.7
SF3B2-202ENST00000524475 LGALS9CQ6DKI2 356 aa10.66□□□□□ -0.7
SF3B2-202ENST00000524475 Q6ZTI0 123 aa10.66□□□□□ -0.7
SF3B2-202ENST00000524475 TMEM183AQ8IXX5 376 aa10.66□□□□□ -0.7
SF3B2-202ENST00000524475 NDUFAF3Q9BU61 184 aa10.66□□□□□ -0.7
SF3B2-202ENST00000524475 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
SF3B2-202ENST00000524475 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
SF3B2-202ENST00000524475 MUC4Q99102 2169 aa10.66□□□□□ -0.7
SF3B2-202ENST00000524475 IGHV3-16A0A0C4DH30 117 aa10.65□□□□□ -0.7
SF3B2-202ENST00000524475 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
SF3B2-202ENST00000524475 TYMSP04818 313 aa10.65□□□□□ -0.7
SF3B2-202ENST00000524475 BCL2P10415 239 aa10.65□□□□□ -0.7
SF3B2-202ENST00000524475 MEF2BQ02080 365 aaPredicted RBP10.65□□□□□ -0.7
SF3B2-202ENST00000524475 MDFICQ9P1T7 246 aa10.65□□□□□ -0.7
SF3B2-202ENST00000524475 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.7
SF3B2-202ENST00000524475 NAGKQ9UJ70 344 aa10.65□□□□□ -0.7
SF3B2-202ENST00000524475 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 GAGE12BA1L429 117 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 PDE6DO43924 150 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 GAGE7O76087 117 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 GAGE12FP0CL80 117 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 GAGE12GP0CL81 117 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 GAGE12IP0CL82 117 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 C15orf53Q8NAA6 179 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 RASL10AQ92737 203 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 ZC2HC1AQ96GY0 325 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 MLST8Q9BVC4 326 aa10.64□□□□□ -0.71
SF3B2-202ENST00000524475 HTN3P15516 51 aa10.63□□□□□ -0.71
SF3B2-202ENST00000524475 ZNF674Q2M3X9 581 aa10.63□□□□□ -0.71
SF3B2-202ENST00000524475 FAM162BQ5T6X4 162 aa10.63□□□□□ -0.71
SF3B2-202ENST00000524475 TMEM88Q6PEY1 159 aa10.63□□□□□ -0.71
SF3B2-202ENST00000524475 VAX2Q9UIW0 290 aa10.63□□□□□ -0.71
SF3B2-202ENST00000524475 TRGV2A0A075B6R0 118 aa10.62□□□□□ -0.71
SF3B2-202ENST00000524475 H3BNG1 76 aa10.62□□□□□ -0.71
SF3B2-202ENST00000524475 GNRH2O43555 120 aa10.62□□□□□ -0.71
SF3B2-202ENST00000524475 NDUFS6O75380 124 aaKnown RBP10.62□□□□□ -0.71
SF3B2-202ENST00000524475 CRIP1P50238 77 aa10.62□□□□□ -0.71
SF3B2-202ENST00000524475 PTH2Q96A98 100 aa10.62□□□□□ -0.71
SF3B2-202ENST00000524475 SMIM12Q96EX1 92 aa10.62□□□□□ -0.71
SF3B2-202ENST00000524475 IGKV3D-20A0A0C4DH25 116 aa10.61□□□□□ -0.71
SF3B2-202ENST00000524475 F5H768 121 aa10.61□□□□□ -0.71
SF3B2-202ENST00000524475 M0R2P5 195 aa10.61□□□□□ -0.71
SF3B2-202ENST00000524475 RPL35P42766 123 aaKnown RBP10.61□□□□□ -0.71
SF3B2-202ENST00000524475 DNLZQ5SXM8 178 aa10.61□□□□□ -0.71
SF3B2-202ENST00000524475 BAGE2Q86Y30 109 aa10.61□□□□□ -0.71
SF3B2-202ENST00000524475 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
SF3B2-202ENST00000524475 MRPL16Q9NX20 251 aaKnown RBP10.61□□□□□ -0.71
SF3B2-202ENST00000524475 SH2D1AO60880 128 aa10.6□□□□□ -0.71
SF3B2-202ENST00000524475 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
SF3B2-202ENST00000524475 PIK3CD-AS1Q5SR53 167 aa10.6□□□□□ -0.71
SF3B2-202ENST00000524475 KRBOX1C9JBD0 128 aa10.59□□□□□ -0.71
SF3B2-202ENST00000524475 LY6G6CO95867 125 aa10.59□□□□□ -0.71
SF3B2-202ENST00000524475 P0DMU3 169 aa10.59□□□□□ -0.71
SF3B2-202ENST00000524475 FAM231AP0DMU4 169 aa10.59□□□□□ -0.71
SF3B2-202ENST00000524475 FAM231CP0DMU5 169 aa10.59□□□□□ -0.71
SF3B2-202ENST00000524475 RNASE3P12724 160 aaKnown RBP10.59□□□□□ -0.71
SF3B2-202ENST00000524475 HOXA5P20719 270 aa10.59□□□□□ -0.71
SF3B2-202ENST00000524475 SLAQ13239 276 aa10.59□□□□□ -0.71
SF3B2-202ENST00000524475 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
SF3B2-202ENST00000524475 B4DEV8 164 aa10.58□□□□□ -0.72
SF3B2-202ENST00000524475 TMEM250H0YL14 139 aa10.58□□□□□ -0.72
SF3B2-202ENST00000524475 CXCL1P09341 107 aa10.58□□□□□ -0.72
SF3B2-202ENST00000524475 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
SF3B2-202ENST00000524475 TEX261Q6UWH6 196 aa10.58□□□□□ -0.72
SF3B2-202ENST00000524475 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
SF3B2-202ENST00000524475 IL36BQ9NZH7 164 aa10.58□□□□□ -0.72
SF3B2-202ENST00000524475 RBFOX3A6NFN3 312 aa10.57□□□□□ -0.72
SF3B2-202ENST00000524475 CIDEAO60543 219 aa10.57□□□□□ -0.72
SF3B2-202ENST00000524475 ORM1P02763 201 aa10.57□□□□□ -0.72
SF3B2-202ENST00000524475 ASIPP42127 132 aa10.57□□□□□ -0.72
SF3B2-202ENST00000524475 CENPWQ5EE01 88 aa10.57□□□□□ -0.72
SF3B2-202ENST00000524475 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
SF3B2-202ENST00000524475 OR5I1Q13606 314 aa10.56□□□□□ -0.72
SF3B2-202ENST00000524475 RNF212Q495C1 297 aa10.56□□□□□ -0.72
SF3B2-202ENST00000524475 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
SF3B2-202ENST00000524475 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
SF3B2-202ENST00000524475 NHLRC2Q8NBF2 726 aa10.56□□□□□ -0.72
SF3B2-202ENST00000524475 MED9Q9NWA0 146 aa10.56□□□□□ -0.72
SF3B2-202ENST00000524475 NACAE9PAV3 2078 aa10.55□□□□□ -0.72
SF3B2-202ENST00000524475 C9JCJ5 164 aa10.55□□□□□ -0.72
SF3B2-202ENST00000524475 IGLV2-8P01709 118 aa10.55□□□□□ -0.72
SF3B2-202ENST00000524475 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
SF3B2-202ENST00000524475 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
SF3B2-202ENST00000524475 GNG4P50150 75 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms