RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 Q6ZQT7 251 aa7.12□□□□□ -1.27
CTNNA1-235ENST00000522730 IQCF2Q8IXL9 164 aa7.12□□□□□ -1.27
CTNNA1-235ENST00000522730 EIF4E3Q8N5X7 224 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-235ENST00000522730 SUN5Q8TC36 379 aa7.12□□□□□ -1.27
CTNNA1-235ENST00000522730 TMEM167BQ9NRX6 74 aa7.12□□□□□ -1.27
CTNNA1-235ENST00000522730 KLF12Q9Y4X4 402 aa7.12□□□□□ -1.27
CTNNA1-235ENST00000522730 C16orf90A8MZG2 172 aa7.11□□□□□ -1.27
CTNNA1-235ENST00000522730 ZNF324O75467 553 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-235ENST00000522730 DAZ2Q13117 558 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-235ENST00000522730 PDE6HQ13956 83 aa7.11□□□□□ -1.27
CTNNA1-235ENST00000522730 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
CTNNA1-235ENST00000522730 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
CTNNA1-235ENST00000522730 Q8TAT8 98 aa7.11□□□□□ -1.27
CTNNA1-235ENST00000522730 TP53TG3Q9ULZ0 132 aa7.11□□□□□ -1.27
CTNNA1-235ENST00000522730 KLLNB2CW77 178 aa7.1□□□□□ -1.27
CTNNA1-235ENST00000522730 CSN1S1P47710 185 aa7.1□□□□□ -1.27
CTNNA1-235ENST00000522730 PPT1P50897 306 aa7.1□□□□□ -1.27
CTNNA1-235ENST00000522730 MUC21Q5SSG8 566 aa7.1□□□□□ -1.27
CTNNA1-235ENST00000522730 PRR9Q5T870 116 aa7.1□□□□□ -1.27
CTNNA1-235ENST00000522730 MRPL16Q9NX20 251 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-235ENST00000522730 GNG13Q9P2W3 67 aa7.1□□□□□ -1.27
CTNNA1-235ENST00000522730 ABCA13Q86UQ4 5058 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 IGHV1OR15-1A0A075B7D0 117 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 A0A096LPF7 62 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 PAX4O43316 350 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 PAGE4O60829 102 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 ZNF138P52744 262 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 UBE2G2P60604 165 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 C11orf72Q8NBR9 251 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 VSIG2Q96IQ7 327 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 FAM19A4Q96LR4 140 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 MRPL18Q9H0U6 180 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 MANBALQ9NQG1 85 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 ZNF492Q9P255 531 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 RPH3ALQ9UNE2 315 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 MUC4Q99102 2169 aa7.09□□□□□ -1.27
CTNNA1-235ENST00000522730 A0A1W2PRE2 83 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 LINC00862A6NCI5 91 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 FAM74A7A6NL05 159 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 IFNA1P01562 189 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 BCL2P10415 239 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 CRISP2P16562 243 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 ANXA2RQ3ZCQ2 193 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 ZFAND2AQ8N6M9 145 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 FAM210AQ96ND0 272 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 C8orf49Q96NF6 230 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 Q9H3A6 140 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 OTORQ9NRC9 128 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 ARL2-SNX15V9GYD0 113 aa7.08□□□□□ -1.28
CTNNA1-235ENST00000522730 PGPA6NDG6 321 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 RBFOX3A6NFN3 312 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 H3BNG1 76 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 SPINK4O60575 86 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 TCL1AP56279 114 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 TTC32Q5I0X7 151 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 ZNF506Q5JVG8 444 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 CST9LP1Q5W188 147 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 SPATA12Q7Z6I5 190 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 LYPD1Q8N2G4 141 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 LINC00467Q9BRT7 94 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 MED9Q9NWA0 146 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 VAX2Q9UIW0 290 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 NAGKQ9UJ70 344 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 HHLA3Q9XRX5 114 aa7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 MRPS16Q9Y3D3 137 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-235ENST00000522730 TRGV4A0A0C4DH28 118 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 GGTLC3B5MD39 225 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 TAGLN2P37802 199 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 SUMO1P63165 101 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 ZNF415Q09FC8 603 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 TMEM183BQ1AE95 376 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 TOR2AQ5JU69 321 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 TMEM183AQ8IXX5 376 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 CMTM2Q8TAZ6 248 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 NKX6-2Q9C056 277 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 EIF5A2Q9GZV4 153 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 MDFICQ9P1T7 246 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
CTNNA1-235ENST00000522730 RAB19A4D1S5 217 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 DIRC3C9JPN6 131 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 NXPH4O95158 308 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 SFTA3P0C7M3 94 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 SRSF3P84103 164 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 IBA57Q5T440 356 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 FAM159AQ6UWV7 190 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 COMMD7Q86VX2 200 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 TXNDC17Q9BRA2 123 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 UPK3BQ9BT76 320 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 PRO0255Q9UI72 69 aa7.05□□□□□ -1.28
CTNNA1-235ENST00000522730 SIVA1O15304 175 aa7.04□□□□□ -1.28
CTNNA1-235ENST00000522730 GNRH2O43555 120 aa7.04□□□□□ -1.28
CTNNA1-235ENST00000522730 CRYBA4P53673 196 aa7.04□□□□□ -1.28
CTNNA1-235ENST00000522730 GNG5P63218 68 aa7.04□□□□□ -1.28
CTNNA1-235ENST00000522730 MEF2BQ02080 365 aaPredicted RBP7.04□□□□□ -1.28
CTNNA1-235ENST00000522730 FHL2Q14192 279 aa7.04□□□□□ -1.28
CTNNA1-235ENST00000522730 PEA15Q15121 130 aa7.04□□□□□ -1.28
CTNNA1-235ENST00000522730 GOLT1AQ6ZVE7 132 aa7.04□□□□□ -1.28
CTNNA1-235ENST00000522730 C5orf17Q8NAS9 161 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms