RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	METTL15P1	P0C7V9	234 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	NPPC	P23582	126 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	MT3	P25713	68 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	HERVK_113	P61574	105 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	LYZ	P61626	148 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798		Q6ZVH6	145 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	TCF24	Q7RTU0	167 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	TMEM144	Q7Z5S9	345 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	ZNF738	Q8NE65	137 aa		4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	LSM5	Q9Y4Y9	91 aa	Known RBP	4.88	□□□□□ -1.63
SPIDR-215	ENST00000521798	RYR3	Q15413	4870 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	IGKV3-7	A0A075B6H7	116 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798		A0A0J9YXV3	536 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	FAM24A	A6NFZ4	105 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	OR4C46	A6NHA9	309 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	FNDC10	F2Z333	226 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	CD5	P06127	495 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	H2BFS	P57053	126 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	S100A10	P60903	97 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	RRAS2	P62070	204 aa	Predicted RBP	4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	AKR1C1	Q04828	323 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	OR2F1	Q13607	317 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	BOD1L2	Q8IYS8	172 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	OR10P1	Q8NGE3	313 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	TM2D3	Q9BRN9	247 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	NMES1	Q9C002	83 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	MS4A6A	Q9H2W1	248 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	TUBA4B	Q9H853	241 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	LYRM2	Q9NU23	88 aa	Predicted RBP	4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	RABAC1	Q9UI14	185 aa		4.87	□□□□□ -1.63
SPIDR-215	ENST00000521798	TRAV2	A0A0B4J234	112 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	FAM240A	A0A1B0GVK7	77 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	DEDD	O75618	318 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	FABP1	P07148	127 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	CTRL	P40313	264 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	EIF2B2	P49770	351 aa	Known RBP	4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	FAM24B	Q8N5W8	94 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	DCANP1	Q8TF63	244 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	NARS2	Q96I59	477 aa	Known RBP	4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	PBDC1	Q9BVG4	233 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	GGACT	Q9BVM4	153 aa		4.86	□□□□□ -1.63
SPIDR-215	ENST00000521798	DNAH1	Q9P2D7	4330 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	IGSF23	A1L1A6	192 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798		H0Y9J4	135 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	DNASE2	O00115	360 aa	Predicted RBP	4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	SSNA1	O43805	119 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	CST7	O76096	145 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	CFD	P00746	253 aa	Predicted RBP	4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	INS	P01308	110 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	PVALB	P20472	110 aa	Predicted RBP	4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	SULT1A1	P50225	295 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	SLC38A11	Q08AI6	406 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	CYP2G1P	Q6ZSU1	146 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	NPVF	Q9HCQ7	196 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	OR5AC2	Q9NZP5	309 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	VAX2	Q9UIW0	290 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	ALG5	Q9Y673	324 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798		U3KQK5	164 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	RYR2	Q92736	4967 aa		4.85	□□□□□ -1.63
SPIDR-215	ENST00000521798	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	TRAV8-4	A0A0B4J246	113 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798		P01737	135 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	LINC00869	P0C866	280 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	ORM2	P19652	201 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	CXCL3	P19876	107 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	AP2S1	P53680	142 aa	Predicted RBP	4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	DEFB131A	P59861	70 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	DAZ2	Q13117	558 aa	Known RBP	4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	TMEM183B	Q1AE95	376 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	C1orf194	Q5T5A4	169 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	SSX7	Q7RTT5	188 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	TMEM183A	Q8IXX5	376 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	PPP1R1C	Q8WVI7	109 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	MGST2	Q99735	147 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	GGTLC1	Q9BX51	225 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	DAZ3	Q9NR90	486 aa	Known RBP	4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	DOK5	Q9P104	306 aa		4.84	□□□□□ -1.63
SPIDR-215	ENST00000521798	UBE2L5P	A0A1B0GUS4	154 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	ZNF98	A6NK75	572 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798		H3BRN7	92 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	MPC2	O95563	127 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	RLN2	P04090	185 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	ZNF688	P0C7X2	276 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	S100A11	P31949	105 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	NMU	P48645	174 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	CMC4	P56277	68 aa	Predicted RBP	4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	HBG1	P69891	147 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	HBG2	P69892	147 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	RGS21	Q2M5E4	152 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	PATE2	Q6UY27	113 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	MRPL52	Q86TS9	123 aa	Known RBP	4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	STX12	Q86Y82	276 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	SLC7A5P1	Q8MH63	180 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	OR10G4	Q8NGN3	311 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	PPP1R14B	Q96C90	147 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	TMEM147	Q9BVK8	224 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	KRTAP4-11	Q9BYQ6	195 aa		4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.83	□□□□□ -1.64
SPIDR-215	ENST00000521798	SAV1	Q9H4B6	383 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms