RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SPINK4O60575 86 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHG4P01861 327 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 S100A9P06702 114 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 FABP4P15090 132 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 HLA-DMBP28068 263 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 S100A2P29034 98 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 SEC61GP60059 68 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 SLC35B1P78383 322 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 PDE6HQ13956 83 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 LY6EQ16553 131 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 MRPL54Q6P161 138 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 TOMM20LQ6UXN7 152 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 LYPD1Q8N2G4 141 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 TMEM256Q8N2U0 113 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 TMEM75Q8N9X5 138 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 NUP35Q8NFH5 326 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 TSKUQ8WUA8 353 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 ZC2HC1AQ96GY0 325 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 PACRGQ96M98 296 aaPredicted RBP3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 NOL4LQ96MY1 436 aaPredicted RBP3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 RPP21Q9H633 154 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 RABAC1Q9UI14 185 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 LINC00527Q9UJ94 153 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 SMAD5-AS1Q9Y6J3 95 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 ZANQ9Y493 2812 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHV3-16A0A0C4DH30 117 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 FAM223BA6NKX1 122 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 B4DSR2 109 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 ZNF253O75346 499 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 TRBV12-3P01733 135 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHG2P01859 326 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 MT-ND6P03923 174 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 RPL7P18124 248 aaKnown RBP3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 PSG3Q16557 428 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 DNLZQ5SXM8 178 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 CLEC19AQ6UXS0 136 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 TCF24Q7RTU0 167 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 PRNTQ86SH4 94 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 FAM223AQ8IWN6 122 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 MAPK1IP1LQ8NDC0 245 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 CMTM2Q8TAZ6 248 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 GTSF1Q8WW33 167 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 C9orf85Q96MD7 179 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 GNB1LQ9BYB4 327 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 NIT2Q9NQR4 276 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 CELSR1Q9NYQ6 3014 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 PSG8Q9UQ74 426 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 CENPEQ02224 2701 aa3.57□□□□□ -1.84
CTNNA1-212ENST00000518919 CSPG4Q6UVK1 2322 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 NBPF19A0A087WUL8 3843 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 A0A087WYN8 130 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 TRBV7-1A0A0A6YYK4 115 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 TRAV8-2A0A0B4J237 113 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHV3-66A0A0C4DH42 116 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 HIGD1CA8MV81 97 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 LINC00587B1AMM8 73 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 H3BUA1 57 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 ZNF207O43670 478 aaKnown RBP3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 SERF1AO75920 110 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 BRI3O95415 125 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 P01737 135 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 HLA-DQA1P01909 254 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 TRGV3P03979 118 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 GZMBP10144 247 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 ESDP10768 282 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 CRIP1P50238 77 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 S100A12P80511 92 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 RPL19P84098 196 aaKnown RBP3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 ATP5G2Q06055 141 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 Q0VG73 95 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 SLAQ13239 276 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 LAGE3Q14657 143 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 DEFB112Q30KQ8 113 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 KRTAP24-1Q3LI83 254 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 COX19Q49B96 90 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 C9orf66Q5T8R8 295 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 RASL11AQ6T310 242 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 REG3GQ6UW15 175 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 ATP5L2Q7Z4Y8 100 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 S100A7AQ86SG5 101 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 OR4B1Q8NGF8 309 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 Q8TAT8 98 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 KRTAP4-5Q9BYR2 181 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 GNB4Q9HAV0 340 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 ZNF331Q9NQX6 463 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 SIGLEC8Q9NYZ4 499 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 NAT8BQ9UHF3 227 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 TNFRSF18Q9Y5U5 241 aa3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 ANKRD17O75179 2603 aaKnown RBP3.56□□□□□ -1.84
CTNNA1-212ENST00000518919 CSMD2Q7Z408 3487 aa3.55□□□□□ -1.84
CTNNA1-212ENST00000518919 CHD6Q8TD26 2715 aa3.55□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHV3OR16-13A0A075B7E8 117 aa3.55□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHV3-49A0A0A0MS15 119 aa3.55□□□□□ -1.84
CTNNA1-212ENST00000518919 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHV3-74A0A0B4J1X5 117 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms