RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
TRAPPC9-205ENST00000518839 C11orf21Q9P2W6 132 aa11.17□□□□□ -0.62
TRAPPC9-205ENST00000518839 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 APCSP02743 223 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 AMBPP02760 352 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 ARMS2P0C7Q2 107 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 CAMPP49913 170 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 DNLZQ5SXM8 178 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 NAGKQ9UJ70 344 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 CUBNO60494 3623 aa11.16□□□□□ -0.62
TRAPPC9-205ENST00000518839 SETD2Q9BYW2 2564 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 OR5AL1P0C617 328 aa11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 FRMD6-AS1P0C7T7 363 aa11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 ASIPP42127 132 aa11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 CACNG7P62955 275 aa11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 STHQ8IWL8 128 aa11.15□□□□□ -0.62
TRAPPC9-205ENST00000518839 AGRNO00468 2067 aa11.15□□□□□ -0.63
TRAPPC9-205ENST00000518839 SNAI2O43623 268 aa11.14□□□□□ -0.63
TRAPPC9-205ENST00000518839 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
TRAPPC9-205ENST00000518839 ZNF575Q86XF7 245 aa11.14□□□□□ -0.63
TRAPPC9-205ENST00000518839 TMEM158Q8WZ71 300 aa11.14□□□□□ -0.63
TRAPPC9-205ENST00000518839 C20orf144Q9BQM9 153 aa11.14□□□□□ -0.63
TRAPPC9-205ENST00000518839 SSBP4Q9BWG4 385 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-205ENST00000518839 SORL1Q92673 2214 aa11.14□□□□□ -0.63
TRAPPC9-205ENST00000518839 TRAV12-3A0A0B4J271 114 aa11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 C5orf52A6NGY3 159 aa11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 M0R2Z0 102 aa11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 ZNF324O75467 553 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 NDUFA6P56556 154 aa11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 KIR3DS1Q14943 382 aa11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 TDRG1Q3Y452 100 aa11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 ZNF493Q6ZR52 646 aa11.13□□□□□ -0.63
TRAPPC9-205ENST00000518839 LOC105371267A0A1B0GV96 52 aa11.12□□□□□ -0.63
TRAPPC9-205ENST00000518839 NUTF2P61970 127 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-205ENST00000518839 MUC21Q5SSG8 566 aa11.12□□□□□ -0.63
TRAPPC9-205ENST00000518839 SHISA2Q6UWI4 295 aa11.12□□□□□ -0.63
TRAPPC9-205ENST00000518839 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 TRAV12-2A0A075B6T6 113 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 SNRPEP62304 92 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 SLAQ13239 276 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 TWIST1Q15672 202 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 ZNF124Q15973 351 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 C12orf54Q6X4T0 127 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 Q6ZQT7 251 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 TRPT1Q86TN4 253 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 C3orf56Q8N813 242 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
TRAPPC9-205ENST00000518839 TRGV11A0A075B6L2 103 aa11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 RBMY1BA6NDE4 496 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 RBMY1EA6NEQ0 496 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 H3BVH4 76 aa11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 UBE2CO00762 179 aa11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 INSP01308 110 aa11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 RBMY1DP0C7P1 496 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 NTF3P20783 257 aa11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 SMIM15Q7Z3B0 74 aa11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 TMEM191AQ9H0A3 160 aa11.1□□□□□ -0.63
TRAPPC9-205ENST00000518839 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 CD7P09564 240 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 HOXA5P20719 270 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 Q0VG73 95 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 OR10J3Q5JRS4 329 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 GTSCR1Q86UQ5 136 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 LINC00467Q9BRT7 94 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 SCRT2Q9NQ03 307 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 C19orf73Q9NVV2 129 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
TRAPPC9-205ENST00000518839 LOC102724200A0A096LPH7 203 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-205ENST00000518839 SRIP30626 198 aa11.08□□□□□ -0.64
TRAPPC9-205ENST00000518839 FXYD7P58549 80 aa11.08□□□□□ -0.64
TRAPPC9-205ENST00000518839 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
TRAPPC9-205ENST00000518839 MORN3Q6PF18 240 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-205ENST00000518839 WIPF1O43516 503 aa11.07□□□□□ -0.64
TRAPPC9-205ENST00000518839 GNRH2O43555 120 aa11.07□□□□□ -0.64
TRAPPC9-205ENST00000518839 RNASE3P12724 160 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-205ENST00000518839 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
TRAPPC9-205ENST00000518839 FAM104BQ5XKR9 115 aa11.07□□□□□ -0.64
TRAPPC9-205ENST00000518839 TMEM256Q8N2U0 113 aa11.07□□□□□ -0.64
TRAPPC9-205ENST00000518839 OR10AG1Q8NH19 301 aa11.07□□□□□ -0.64
TRAPPC9-205ENST00000518839 JMJD1CQ15652 2540 aa11.06□□□□□ -0.64
TRAPPC9-205ENST00000518839 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-205ENST00000518839 C1QTNF4Q9BXJ3 329 aa11.06□□□□□ -0.64
TRAPPC9-205ENST00000518839 TIMM8BQ9Y5J9 83 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-205ENST00000518839 IGHV3-16A0A0C4DH30 117 aa11.05□□□□□ -0.64
TRAPPC9-205ENST00000518839 MUC21A0A0G2JKD1 596 aa11.05□□□□□ -0.64
TRAPPC9-205ENST00000518839 MUC21A0A140T8X8 626 aa11.05□□□□□ -0.64
TRAPPC9-205ENST00000518839 NXPH4O95158 308 aa11.05□□□□□ -0.64
TRAPPC9-205ENST00000518839 S100A2P29034 98 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms