RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 KCNS1Q96KK3 526 aa15.52■□□□□ 0.08
VEGFA-217ENST00000518538 ZFP30Q9Y2G7 519 aa15.52■□□□□ 0.08
VEGFA-217ENST00000518538 TRGV1A0A0A0MS02 117 aa15.51■□□□□ 0.07
VEGFA-217ENST00000518538 SCO2A0A1W2PP80 73 aa15.51■□□□□ 0.07
VEGFA-217ENST00000518538 LGALS9BQ3B8N2 356 aa15.51■□□□□ 0.07
VEGFA-217ENST00000518538 LGALS9CQ6DKI2 356 aa15.51■□□□□ 0.07
VEGFA-217ENST00000518538 ALKAL2Q6UX46 152 aa15.51■□□□□ 0.07
VEGFA-217ENST00000518538 SDF2L1Q9HCN8 221 aa15.51■□□□□ 0.07
VEGFA-217ENST00000518538 MDFICQ9P1T7 246 aa15.51■□□□□ 0.07
VEGFA-217ENST00000518538 BOLA1Q9Y3E2 137 aa15.51■□□□□ 0.07
VEGFA-217ENST00000518538 DYNC2H1Q8NCM8 4307 aaKnown RBP15.51■□□□□ 0.07
VEGFA-217ENST00000518538 F5H768 121 aa15.5■□□□□ 0.07
VEGFA-217ENST00000518538 COX8CQ7Z4L0 72 aa15.5■□□□□ 0.07
VEGFA-217ENST00000518538 C18orf15Q96N68 181 aa15.5■□□□□ 0.07
VEGFA-217ENST00000518538 PLECQ15149 4684 aaKnown RBP15.5■□□□□ 0.07
VEGFA-217ENST00000518538 GNRH2O43555 120 aa15.49■□□□□ 0.07
VEGFA-217ENST00000518538 LTAP01374 205 aa15.49■□□□□ 0.07
VEGFA-217ENST00000518538 TYMSP04818 313 aa15.49■□□□□ 0.07
VEGFA-217ENST00000518538 S100A9P06702 114 aaKnown RBP15.49■□□□□ 0.07
VEGFA-217ENST00000518538 TMEM88Q6PEY1 159 aa15.49■□□□□ 0.07
VEGFA-217ENST00000518538 TXNDC17Q9BRA2 123 aa15.49■□□□□ 0.07
VEGFA-217ENST00000518538 SPXQ9BT56 116 aa15.49■□□□□ 0.07
VEGFA-217ENST00000518538 C11orf21Q9P2W6 132 aa15.49■□□□□ 0.07
VEGFA-217ENST00000518538 TRGV2A0A075B6R0 118 aa15.48■□□□□ 0.07
VEGFA-217ENST00000518538 IGHV3-16A0A0C4DH30 117 aa15.48■□□□□ 0.07
VEGFA-217ENST00000518538 MRPL16Q9NX20 251 aaKnown RBP15.48■□□□□ 0.07
VEGFA-217ENST00000518538 IFNA1P01562 189 aa15.47■□□□□ 0.07
VEGFA-217ENST00000518538 ZC2HC1AQ96GY0 325 aa15.47■□□□□ 0.07
VEGFA-217ENST00000518538 FABP5P3A8MUU1 101 aa15.46■□□□□ 0.07
VEGFA-217ENST00000518538 BLOC1S1P78537 153 aa15.46■□□□□ 0.07
VEGFA-217ENST00000518538 C11orf52Q96A22 123 aa15.46■□□□□ 0.07
VEGFA-217ENST00000518538 C15orf53Q8NAA6 179 aa15.45■□□□□ 0.06
VEGFA-217ENST00000518538 LYSTQ99698 3801 aa15.44■□□□□ 0.06
VEGFA-217ENST00000518538 BCL2P10415 239 aa15.44■□□□□ 0.06
VEGFA-217ENST00000518538 TAGLN2P37802 199 aaKnown RBP15.44■□□□□ 0.06
VEGFA-217ENST00000518538 CRIP1P50238 77 aa15.44■□□□□ 0.06
VEGFA-217ENST00000518538 MEF2BQ02080 365 aaPredicted RBP15.44■□□□□ 0.06
VEGFA-217ENST00000518538 SACSQ9NZJ4 4579 aa15.44■□□□□ 0.06
VEGFA-217ENST00000518538 M0R2P5 195 aa15.43■□□□□ 0.06
VEGFA-217ENST00000518538 HOXA5P20719 270 aa15.43■□□□□ 0.06
VEGFA-217ENST00000518538 OR5I1Q13606 314 aa15.43■□□□□ 0.06
VEGFA-217ENST00000518538 FAM162BQ5T6X4 162 aa15.43■□□□□ 0.06
VEGFA-217ENST00000518538 RASL10AQ92737 203 aa15.43■□□□□ 0.06
VEGFA-217ENST00000518538 IGKV3D-20A0A0C4DH25 116 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 PDE6DO43924 150 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 SH2D1AO60880 128 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 P0DMU3 169 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 FAM231AP0DMU4 169 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 FAM231CP0DMU5 169 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 ZNF674Q2M3X9 581 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 BAGE2Q86Y30 109 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 VAX2Q9UIW0 290 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 ALMS1Q8TCU4 4167 aa15.42■□□□□ 0.06
VEGFA-217ENST00000518538 RPL35P42766 123 aaKnown RBP15.41■□□□□ 0.06
VEGFA-217ENST00000518538 NHLRC2Q8NBF2 726 aa15.41■□□□□ 0.06
VEGFA-217ENST00000518538 LYPD6BQ8NI32 183 aa15.41■□□□□ 0.06
VEGFA-217ENST00000518538 RYR3Q15413 4870 aa15.41■□□□□ 0.06
VEGFA-217ENST00000518538 ORM1P02763 201 aa15.4■□□□□ 0.06
VEGFA-217ENST00000518538 C9orf85Q96MD7 179 aa15.4■□□□□ 0.06
VEGFA-217ENST00000518538 DERL1Q9BUN8 251 aa15.4■□□□□ 0.06
VEGFA-217ENST00000518538 MLST8Q9BVC4 326 aa15.4■□□□□ 0.06
VEGFA-217ENST00000518538 TRAV26-1A0A087WT03 109 aa15.39■□□□□ 0.05
VEGFA-217ENST00000518538 B4DEV8 164 aa15.39■□□□□ 0.05
VEGFA-217ENST00000518538 H3BNG1 76 aa15.38■□□□□ 0.05
VEGFA-217ENST00000518538 IGHV3-53P01767 116 aa15.38■□□□□ 0.05
VEGFA-217ENST00000518538 RNASE3P12724 160 aaKnown RBP15.38■□□□□ 0.05
VEGFA-217ENST00000518538 RYR2Q92736 4967 aa15.38■□□□□ 0.05
VEGFA-217ENST00000518538 A0A0J9YY99 117 aa15.37■□□□□ 0.05
VEGFA-217ENST00000518538 KRBOX1C9JBD0 128 aa15.37■□□□□ 0.05
VEGFA-217ENST00000518538 M0R036 132 aa15.37■□□□□ 0.05
VEGFA-217ENST00000518538 NUDT3O95989 172 aa15.37■□□□□ 0.05
VEGFA-217ENST00000518538 ASIPP42127 132 aa15.37■□□□□ 0.05
VEGFA-217ENST00000518538 LINC01559Q495D7 138 aa15.37■□□□□ 0.05
VEGFA-217ENST00000518538 S100A4P26447 101 aaKnown RBP15.36■□□□□ 0.05
VEGFA-217ENST00000518538 DNLZQ5SXM8 178 aa15.36■□□□□ 0.05
VEGFA-217ENST00000518538 POM121L12Q8N7R1 296 aa15.36■□□□□ 0.05
VEGFA-217ENST00000518538 PTH2Q96A98 100 aa15.36■□□□□ 0.05
VEGFA-217ENST00000518538 MED9Q9NWA0 146 aa15.36■□□□□ 0.05
VEGFA-217ENST00000518538 DNAH1Q9P2D7 4330 aa15.35■□□□□ 0.05
VEGFA-217ENST00000518538 TRAV4A0A0B4J268 109 aa15.35■□□□□ 0.05
VEGFA-217ENST00000518538 FHL2Q14192 279 aa15.35■□□□□ 0.05
VEGFA-217ENST00000518538 ZNF876PQ49A33 203 aa15.35■□□□□ 0.05
VEGFA-217ENST00000518538 CENPWQ5EE01 88 aa15.35■□□□□ 0.05
VEGFA-217ENST00000518538 RBFOX3A6NFN3 312 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 C9JCJ5 164 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 SFTA3P0C7M3 94 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 SLAQ13239 276 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 SMIM12Q96EX1 92 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 VSIG2Q96IQ7 327 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 ZNF479Q96JC4 524 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 IL36BQ9NZH7 164 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 PRO0255Q9UI72 69 aa15.34■□□□□ 0.05
VEGFA-217ENST00000518538 GNG4P50150 75 aa15.33■□□□□ 0.04
VEGFA-217ENST00000518538 RNF212Q495C1 297 aa15.33■□□□□ 0.04
VEGFA-217ENST00000518538 ZNF506Q5JVG8 444 aa15.33■□□□□ 0.04
VEGFA-217ENST00000518538 PRR27Q6MZM9 219 aa15.33■□□□□ 0.04
VEGFA-217ENST00000518538 TEX261Q6UWH6 196 aa15.33■□□□□ 0.04
VEGFA-217ENST00000518538 UBE2DNLQ8IWF7 75 aa15.33■□□□□ 0.04
VEGFA-217ENST00000518538 OR4C5Q8NGB2 326 aa15.33■□□□□ 0.04
VEGFA-217ENST00000518538 MUC4Q99102 2169 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms